KEGG   Variovorax sp. PMC12: C4F17_20670
Entry
C4F17_20670       CDS       T05380                                 
Name
(GenBank) ABC transporter permease
  KO
K01999  branched-chain amino acid transport system substrate-binding protein
Organism
vam  Variovorax sp. PMC12
Pathway
vam02010  ABC transporters
vam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    C4F17_20670
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C4F17_20670
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_20670
Transporters [BR:vam02000]
 ABC transporters, prokaryotic type
  Phosphate and amino acid transporters
   Branched-chain amino acid transporter
    C4F17_20670
SSDB
Motif
Pfam: Peripla_BP_6 DUF8088
Other DBs
NCBI-ProteinID: AVQ83183
LinkDB
Position
1:complement(4455408..4456739)
AA seq 443 aa
MKLKSLALTAALVASTLGAMLAPSVAQAQAKEQFFPLLVYRTGPYAPNGTPWANGKQDYL
KLVNAQGGINGVKITFEECETGYATDKGVECYERLKGRPGVALFDPQATGITFALTDKVP
TDKIPLVTLGYGLAASQDGGVFKWNFPLMGSYWTAADILIQHLGKKEGGMDKLKGKKIAL
VYHDSPFGKEPIPLLQERAKMHGFDLSLIPVTAPGVEQKSAWLQVRQQRPDFVLLWGWGV
MNSTALKEAVATGYPREKMYGVWWAGAEPDVKDVGANAKGYNALALNGSGPDNKVIQDIL
KQVHDKGQGTGPKEEVGSVLYTRGAIISMLGVEAVRRAQERFGKGKVMTGEQVRWGLENL
ALDQKKLDALGFAGVMRPVSTSCQDHIGSTWARMETWDGAKWNIAPDWYQADDQIIKPMA
KAAADKYATEKKLTRREAADCQS
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgaaactgaaatcgctcgctctgaccgccgccctggtggccagcaccctcggcgccatg
ctcgcgccatcggtcgcccaggcgcaggccaaggaacagttcttcccgctgctggtgtac
cgcaccggcccctacgcgcccaacggcacgccctgggccaacggcaagcaggactacctg
aagctggtgaacgcgcaaggcggcatcaacggcgtgaagatcacgtttgaagaatgcgaa
acgggctacgccaccgacaagggcgtggaatgctacgaacgcctgaagggccgccccggc
gtcgcgttgttcgacccgcaggccaccggcatcaccttcgcgctgaccgacaaggtgccc
accgacaagatcccgctcgtcacgctgggctacggcctcgcggcctcgcaggacggcggc
gtcttcaagtggaacttcccgctgatgggctcctactggaccgcggccgacatcctgatc
cagcacctgggcaagaaggaaggcggcatggacaagctcaagggcaagaagatcgccctc
gtctaccacgactcgcccttcggcaaggaaccgattccgctgctgcaggagcgcgcgaag
atgcacggcttcgacctgtcgctgattccggtgacggcgccgggcgtcgagcagaagtcg
gcctggctgcaggtgcgccagcagcgccccgacttcgtgctgctgtggggctggggcgtg
atgaactccaccgcgctgaaagaggccgtggccaccggctacccgcgcgagaagatgtac
ggcgtgtggtgggccggcgccgagcccgacgtgaaggacgtgggcgccaacgccaagggc
tacaacgcgctggcgctgaacggttccggtcccgacaacaaggtgatccaggacatcctc
aagcaggtgcacgacaagggccagggcacgggcccgaaggaagaagtgggctcagtgctg
tacacgcgcggcgcgatcatctcgatgctcggcgtcgaggcggtgcggcgcgcgcaggag
cgcttcggcaagggcaaggtcatgaccggcgagcaggtgcgctggggcctggagaacctg
gcgctcgaccagaagaagctcgacgcgctgggcttcgcgggcgtgatgcgtccggtgagc
acctcgtgccaggaccacatcggctcgacctgggcgcgcatggaaacctgggacggcgcc
aagtggaacatcgcgcccgactggtaccaggccgacgaccagatcatcaagccgatggcc
aaggcagcggccgacaagtacgcaaccgaaaagaaactgacgcgccgcgaggcagccgac
tgccagtcttga

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