Variovorax sp. PMC12: C4F17_20670
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Entry
C4F17_20670 CDS
T05380
Name
(GenBank) ABC transporter permease
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_20670
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_20670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_20670
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_20670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
DUF8088
Motif
Other DBs
NCBI-ProteinID:
AVQ83183
LinkDB
All DBs
Position
1:complement(4455408..4456739)
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AA seq
443 aa
AA seq
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MKLKSLALTAALVASTLGAMLAPSVAQAQAKEQFFPLLVYRTGPYAPNGTPWANGKQDYL
KLVNAQGGINGVKITFEECETGYATDKGVECYERLKGRPGVALFDPQATGITFALTDKVP
TDKIPLVTLGYGLAASQDGGVFKWNFPLMGSYWTAADILIQHLGKKEGGMDKLKGKKIAL
VYHDSPFGKEPIPLLQERAKMHGFDLSLIPVTAPGVEQKSAWLQVRQQRPDFVLLWGWGV
MNSTALKEAVATGYPREKMYGVWWAGAEPDVKDVGANAKGYNALALNGSGPDNKVIQDIL
KQVHDKGQGTGPKEEVGSVLYTRGAIISMLGVEAVRRAQERFGKGKVMTGEQVRWGLENL
ALDQKKLDALGFAGVMRPVSTSCQDHIGSTWARMETWDGAKWNIAPDWYQADDQIIKPMA
KAAADKYATEKKLTRREAADCQS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaatcgctcgctctgaccgccgccctggtggccagcaccctcggcgccatg
ctcgcgccatcggtcgcccaggcgcaggccaaggaacagttcttcccgctgctggtgtac
cgcaccggcccctacgcgcccaacggcacgccctgggccaacggcaagcaggactacctg
aagctggtgaacgcgcaaggcggcatcaacggcgtgaagatcacgtttgaagaatgcgaa
acgggctacgccaccgacaagggcgtggaatgctacgaacgcctgaagggccgccccggc
gtcgcgttgttcgacccgcaggccaccggcatcaccttcgcgctgaccgacaaggtgccc
accgacaagatcccgctcgtcacgctgggctacggcctcgcggcctcgcaggacggcggc
gtcttcaagtggaacttcccgctgatgggctcctactggaccgcggccgacatcctgatc
cagcacctgggcaagaaggaaggcggcatggacaagctcaagggcaagaagatcgccctc
gtctaccacgactcgcccttcggcaaggaaccgattccgctgctgcaggagcgcgcgaag
atgcacggcttcgacctgtcgctgattccggtgacggcgccgggcgtcgagcagaagtcg
gcctggctgcaggtgcgccagcagcgccccgacttcgtgctgctgtggggctggggcgtg
atgaactccaccgcgctgaaagaggccgtggccaccggctacccgcgcgagaagatgtac
ggcgtgtggtgggccggcgccgagcccgacgtgaaggacgtgggcgccaacgccaagggc
tacaacgcgctggcgctgaacggttccggtcccgacaacaaggtgatccaggacatcctc
aagcaggtgcacgacaagggccagggcacgggcccgaaggaagaagtgggctcagtgctg
tacacgcgcggcgcgatcatctcgatgctcggcgtcgaggcggtgcggcgcgcgcaggag
cgcttcggcaagggcaaggtcatgaccggcgagcaggtgcgctggggcctggagaacctg
gcgctcgaccagaagaagctcgacgcgctgggcttcgcgggcgtgatgcgtccggtgagc
acctcgtgccaggaccacatcggctcgacctgggcgcgcatggaaacctgggacggcgcc
aagtggaacatcgcgcccgactggtaccaggccgacgaccagatcatcaagccgatggcc
aaggcagcggccgacaagtacgcaaccgaaaagaaactgacgcgccgcgaggcagccgac
tgccagtcttga
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