Variovorax sp. PMC12: C4F17_20775
Help
Entry
C4F17_20775 CDS
T05380
Name
(GenBank) two-component system sensor histidine kinase KdbD
KO
K07646
two-component system, OmpR family, sensor histidine kinase KdpD [EC:
2.7.13.3
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_20775
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vam01001
]
C4F17_20775
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vam02022
]
C4F17_20775
Enzymes [BR:
vam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
C4F17_20775
Protein kinases [BR:
vam01001
]
Histidine kinases
OmpR family
C4F17_20775
Two-component system [BR:
vam02022
]
OmpR family
KdpD-KdpE (potassium transport)
C4F17_20775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdpD
DUF4118
HATPase_c
HisKA
GAF_3
HATPase_c_2
GAF_2
Usp
AAA_30
GAF
Motif
Other DBs
NCBI-ProteinID:
AVQ83203
LinkDB
All DBs
Position
1:4478977..4481730
Genome browser
AA seq
917 aa
AA seq
DB search
MLDDRPDPDALLAQLRSDEARAQRGKLRIYFGASAGVGKTWAMLSAAQRERAAGRDVLIG
VVETHGRSETAALLAGLDALPLRELAHRGRTLAEFDLDAALARKPAVLLVDELAHTNAPG
SRHAKRWQDVQELLAAGIEVWSALNVQHLESLNGTVGAITGVRVHETVPDTVLDEADEVV
LVDVTPDELTARLAAGKVYLPQQAERAAQNFFRKGNLIALREIALRRTAEHVEDDVRGWR
VEQSGPGAGGNGKGRGLQAWNTSGAILACVGPHEGAAQTVRTAARLAGQLNVRWHAVYVE
TPRLQRLAAAERDRILAVLKLAEELGAATAVLTGSDVAEQLAEQARRLNCATLVLGRPEP
AAGWRRWWPAAASPTLSRALAQRAPTLDIMEVAPADSSRRLSRAPLEGARIDSDDHEKAP
TYWPAYAWATATSIALTLVCTPLARVLELSNIVMLFLLGVVGVAMRFGRGPSALAALLNV
AAFDYFFVPPRMSFAVSDVQYVLTFAIMLGVGLLVGQLTAGLRFAAGVSTSRERRARSLF
ELTRELSAALESSQVVTLGTAAVQGHFGGHALVLVTDAADQLVMPDHAPEGFDPQVADWA
FRHGQPAGLATATLAAQPWHYVPLRAPMRVRGVLALSPAQPRWLLIPEQAQQLDTLARQI
AIALERVHYVEVAQQAVVEMESERLRNALLGAISHDVRTPLTALIALAESLQTLPPEEHD
NAARAIVAQAHELHALVNNLLDMARLESGIAGGAVNLRRDWQSVEEVVGSAIRAARTSLG
DTVVRTALDAGLPLVEFDAVLIERVLVNLLENATKYGAPPIEVGARAEPGTLVLTVRDHG
PGLPAALLGHEQKLFDKFTRGEAESATPGVGLGLAICKAVVSAHGGEITAANARGGGAEF
TVTLPRREPPESAEAQL
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgaccgccccgaccccgacgccctgctcgcgcaactgcgcagcgacgaggcg
cgcgcgcagcgcggcaagctgcgcatctacttcggcgccagcgcgggcgtcggcaagacc
tgggccatgctgagcgccgcgcagcgcgagcgcgccgccggccgcgacgtgctcatcggc
gtggtcgagacccacggccgcagcgagaccgccgcgctgctcgcggggctcgacgcgctg
ccgctgcgcgaactggcccaccggggccgcaccctcgccgagttcgacctcgacgccgcg
ctggcccgcaagcccgccgtgctgctggtcgacgagctggcccacaccaacgcgcccggc
tcgcggcacgccaagcgctggcaggacgtgcaggagctgctggccgccggcatcgaggtg
tggtcggcgctcaacgtgcagcacctggagagcctgaacggcaccgtcggcgccatcacc
ggcgtgcgggtgcacgagaccgtgcccgacaccgtgctcgacgaggccgacgaggtggtg
ctggtcgacgtcacgcccgacgagctcacggcgcggctcgcggccggcaaggtctacctg
ccgcagcaggccgagcgcgcggcgcagaacttcttccgcaagggcaacctcatcgcgctg
cgcgagattgcgctgcggcgcaccgccgagcacgtggaagacgacgtgcgcggctggcgc
gtggagcagtcggggccgggcgccggcggcaacggaaaagggcgcggcctgcaggcctgg
aacacctcgggcgcgatcctcgcctgcgtcggtccgcacgaaggcgctgcgcagacggtg
cgcaccgccgcgcggctcgcgggccagctcaatgtgcggtggcatgcggtgtatgtcgag
acgccccgcctgcaaaggctggcggccgccgagcgcgaccgcatcctcgccgtgctcaag
ctggccgaggaactgggcgccgccacggcggtgctcaccggctccgacgtggcggagcag
ctcgccgaacaggcgcggcgcctgaactgcgcaacgctggtgctcgggcgcccggagccg
gccgcgggctggcggcgctggtggccggcggccgcgtcgccgacgctgtcgcgcgcgctg
gcgcaacgcgcgcccacgctcgacatcatggaagtcgcgccggccgacagctcgcgccgc
ctgtcgcgcgcgccgctggaaggcgcgcgcatcgacagcgacgaccacgagaaggcaccc
acctactggccggcctacgcctgggccaccgccaccagcattgcgctgacgctggtgtgc
acgccgctggcccgcgtgctggagctgtcgaacatcgtcatgctgttcctgctgggcgtg
gtgggcgtggcaatgcgcttcgggcgcgggccttcggcgctggcggcattgctcaacgtc
gcagccttcgactatttcttcgtgccgccgcgcatgtcgttcgcggtcagcgacgtgcag
tacgtgctgaccttcgccatcatgctgggcgtcggcctgctggtggggcagctcacggcc
gggctgcgcttcgcggccggtgtgtcgaccagccgcgaacggcgcgcgcgttcgctgttc
gagctgacgcgggagctctccgccgcgctcgaaagctcgcaggtggtcacgctcggcacg
gccgccgtgcaggggcatttcggcggccatgcgctggtgctggtgaccgacgctgccgac
cagctcgtgatgccggaccacgcgcccgagggcttcgatccgcaggtggccgactgggcc
ttccgccacggccagccggccggcctggcgaccgccacgctggccgcgcagccctggcac
tacgtgccgctgcgcgcgccgatgcgcgtgcgcggcgtgctggcgctgtcgcccgcgcag
ccgcgctggctgctcattcccgagcaggcgcagcagctcgacacgctggcgcggcagatc
gccatcgcgctggagcgggtgcactacgtcgaggtggcgcagcaggccgtggtggagatg
gaatctgagcggctgcgcaacgcgctgctgggcgccatctcgcacgacgtgcgcacgccg
ctcaccgcgctgatcgcgctggccgagtcgctgcagaccctgccgcccgaggagcatgac
aacgccgcgcgcgccatcgtcgcgcaggcgcacgagctgcatgcgctggtcaacaacctg
ctggacatggcgcggctcgaaagcggcatcgccggcggcgcggtcaacctgcggcgcgac
tggcagtcggtggaagaggtcgtgggctctgccatccgcgcggcgcgcacctcgctgggc
gacaccgtcgtgcgcaccgcgctcgacgccgggctgccgctggtcgagttcgacgcggtc
ctgatcgaacgcgtgctcgtcaacctgctcgaaaacgccaccaagtacggcgcgccgccc
atcgaagtcggcgcgcgggccgagcccggcacgctggtgctcaccgtgcgcgaccacggc
ccgggcctgcccgccgcgctgctcggccacgagcagaagctgttcgacaagttcacgcgc
ggcgaggccgaatcggcgacgccgggcgtcggcctgggcctggccatctgcaaggcggtg
gtgagcgcgcacggcggcgagatcactgccgcgaatgcgcgcggcggcggtgcagaattc
acggtcacgctgccgcgccgcgagccgcccgaatccgccgaagcccaactctga
DBGET
integrated database retrieval system
