Variovorax sp. PMC12: C4F17_21120
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Entry
C4F17_21120 CDS
T05380
Name
(GenBank) hypothetical protein
KO
K11689
TRAP-type transport system small permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_21120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_21120
Transporters [BR:
vam02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C4F17_21120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctQ
Motif
Other DBs
NCBI-ProteinID:
AVQ84732
LinkDB
All DBs
Position
1:complement(4560308..4560937)
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AA seq
209 aa
AA seq
DB search
MQSFLLAVDRFSTWIGKTFAWCALLLTLLISWEVFSRYALNKPHAWVLDAQIMLYGAMFM
TAGAYTLSKNGHVRGDVLYGFFRPRTQATVDLALYIVFFLPGIVALTWAGWIYAGESLAI
REQTFSAEPLPLYPFKYIIPLAGFTLLLQGIVEIIRCVQCIRQGAWPSREQDVEEVDVEK
LKEMVHVKDEDIAALDRVVVGQTATGGAR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctttcctgctggcggtcgaccggttctccacatggatcggcaagaccttcgcc
tggtgcgcgctgctgctcacgctgctcatcagctgggaggtgttctcgcgctatgcgctc
aacaagccgcacgcctgggtgctggacgcgcagatcatgctgtacggcgcgatgttcatg
accgccggcgcctacacgctctcgaagaacggccacgtgcgcggcgacgtgctctacggc
ttctttcgtccgcgcacgcaggcgacggtcgacttggcgctgtacatcgtgttcttcctg
ccgggcatcgtcgcgctcacctgggccggctggatctacgcgggcgagtcgctcgccatc
cgcgagcagaccttctcggccgagccgctgccgctgtaccccttcaagtacatcatcccg
ctcgcgggcttcacgctgctgctgcagggcatcgtcgagatcatccgctgcgtgcagtgc
atccggcagggcgcatggccttcgcgcgagcaggacgtggaagaggtcgacgtcgagaag
ctcaaggaaatggtgcacgtgaaagacgaggacatcgccgcgctcgaccgcgtggtggtg
gggcagacagccaccgggggcgcgcgatga
DBGET
integrated database retrieval system
