Variovorax sp. PMC12: C4F17_21125
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Entry
C4F17_21125 CDS
T05380
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_21125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_21125
Transporters [BR:
vam02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C4F17_21125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AVQ83260
LinkDB
All DBs
Position
1:complement(4561032..4562147)
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AA seq
371 aa
AA seq
DB search
MTDSKLPRRRGLLKGAAVAAGAMSVPMVSMAQTASLRFQSTWPAKDIFHEYAQDYAKKVN
DMAGNRLKIEVLPAGSVVPAFQLLDAVAKGTLDGGHGVVAYWYGKNSALALWGSGPGYGM
DANMILAWHTYGGGKALMDEIYKGLNLDVASYLYGPMPTQPLGWFKKPVAKAEDMKGLKF
RTVGLAVDVFTDMGAAVNPLPGGEIVPALDRGLIDAAEFNNASSDRVLGFPDVAKNCMLQ
SFHQSGEQFEVLFNGSKLKSLPPELKSIIEYATQAASADMSWKAIDRNSKDYEELKKSGI
KFYKTPDAVLRAQLASWDKTIAKKSAENPMFKKVLDSQRAFAERAGQWQNDYSVDFKMAY
NHYFGRQARKA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagcaaactgccccgccgccgcgggctgctcaagggcgccgccgtggccgcc
ggtgccatgtccgtgccgatggtcagcatggcccagaccgcatccttgcgcttccagagc
acctggcccgcgaaagacatcttccacgagtacgcgcaggactacgccaagaaggtcaat
gacatggcgggcaaccgcctgaagatcgaggtgctgccggccggctcggtggtgcccgca
ttccagctgctcgacgcggtggccaagggcacgctcgacggcggccacggcgtggtcgcg
tactggtacggcaagaactccgcgctcgcgctgtggggctcgggccccggctacggcatg
gacgccaacatgatcctggcctggcacacctacggtggcggcaaggcgctgatggacgag
atctacaagggcctgaacctcgacgtggcctcctacctctacggccccatgcccacgcag
ccgctgggctggttcaagaaaccggtggccaaggccgaggacatgaagggcctgaagttc
cgcaccgtgggcctggccgtggacgtgttcaccgacatgggcgccgccgtgaacccgctg
cccggcggcgagatcgtgcccgcgctggaccgcggcctgatcgacgcggccgagttcaac
aacgcatcgagcgaccgcgtgctgggctttcccgacgtggcgaagaactgcatgctgcag
agcttccaccagagcggcgaacagttcgaggtgctgttcaacggcagcaagctgaagtcg
ctgccgcccgagctcaagtccatcatcgaatacgccacgcaggcggccagcgccgacatg
agctggaaggccatcgaccgcaactcgaaggactacgaagagctgaagaagtccggcatc
aagttctacaagacgcccgacgcggtgctgcgcgcgcagctcgcctcatgggacaagacc
atcgcgaagaagtcggccgagaacccgatgttcaagaaggtgctcgactcgcagcgtgcc
tttgccgaacgcgccggccagtggcagaacgactactcggtcgatttcaagatggcctac
aaccactatttcggacgacaggccaggaaggcctga
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