Variovorax sp. PMC12: C4F17_21210
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Entry
C4F17_21210 CDS
T05380
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_21210
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_21210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_21210
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_21210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
DUF1039
Motif
Other DBs
NCBI-ProteinID:
AVQ83275
LinkDB
All DBs
Position
1:4579748..4580914
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AA seq
388 aa
AA seq
DB search
MKLKTLTTLAVLGLTATLASAQQQQGVTKDEIRIGTIQDLSGPLAGFGKQARNGMQLRVD
ELNEQGNVNGRKLKLFVEDSGYDPKKAVLAAQKLVNQEKIFIMAGHIGTAQNMAAMPVQF
DKNVINYMPITAAREMYEPLNRLKYSFAATYYDQIRLALPKMIKDKGAKKVCTIYQDDEF
GLEVQRGAEAGLKAAGMELAEKTSFKRGATDFSSQVAKMKAANCDLVVLGTIIRETIGTV
GEARKTGFNPTFLGSSAAYTDLIHKLGGKAMDGVYATMTVQNPYTDEQSQPLRFWANKYK
TKFNEDPTVFSVYGYVIIDSFIKAATKAGPNLTTDSFIKAMDSITFEPDMFGSPKSTYTA
TKRLGNDQSRLSQIKDGKWVVVSDYVTP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaagactctgacgacgctggccgtgctgggcctgaccgcgacgcttgcgtcc
gcgcaacagcagcagggcgtgaccaaggacgagatccgcatcggcaccatccaggacctg
tcgggcccgctggcgggcttcggcaagcaggcgcgcaacggcatgcagctgcgcgtggac
gaactcaacgagcagggcaacgtcaacgggcgcaagctgaagctgttcgtggaagattcg
ggctacgacccgaagaaggccgtgctggccgcgcagaagctggtgaaccaggaaaagatc
ttcatcatggccggccacatcggcacggcgcagaacatggcggcgatgccggtgcagttc
gacaagaacgtcatcaactacatgcccatcaccgcggcgcgcgaaatgtacgagccgctg
aaccggctgaagtattcgttcgccgccacctactacgaccagatccgcctggccttgccg
aagatgatcaaggacaagggcgccaagaaggtctgcaccatctaccaggacgacgagttc
ggcctggaggtgcagcgcggcgccgaggcgggcctgaaggccgcgggcatggagctggcc
gagaagacttcgttcaagcgcggcgccaccgacttcagctcgcaggtcgcgaagatgaag
gccgccaactgcgacctcgtggtgctcggcaccatcatccgcgagaccatcggcaccgtg
ggcgaggcgcgcaagaccggcttcaacccgaccttcctgggctccagcgcggcctacacc
gacctgatccacaagctcggcggcaaggcgatggacggcgtctacgccaccatgacggtg
cagaacccctacaccgacgagcaatcgcagccgctgcgcttctgggccaacaagtacaag
accaagttcaacgaagacccgaccgtgttctcggtgtacggctacgtgatcatcgactcg
ttcatcaaggccgcgaccaaggccggcccgaacctcacgaccgacagcttcatcaaggcg
atggacagcatcaccttcgagcccgacatgttcggcagcccgaagagcacctacacggcc
accaagcgcctgggcaacgaccagtcacgcttgtcgcagatcaaggacggcaagtgggtg
gtggtctcggactatgtgacaccatga
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