Variovorax sp. PMC12: C4F17_21610
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Entry
C4F17_21610 CDS
T05380
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_21610
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
C4F17_21610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_21610
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
C4F17_21610
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AVQ83346
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All DBs
Position
1:4645175..4646137
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AA seq
320 aa
AA seq
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MTTFTRRLALTAVAAAAFASLPALAAEKVNLGVSIPAATHSFMGGINYWANQAKKDLEKE
HKDLKITIKTAANAPEQANQLQDLSTVTKINALVVFPFESAALTKPVAQVKAKGAYVTVV
DRGLTDTSAQDAYVAGDNTAFGKIPAEYIVKQLNGKGNVVALRGIATTLDNERMDAFNAV
LKGSPDIKLLDAKYANWNRDDAFKVTQDYLTRFKNIDAIWAADDDMAVGVLKAISQAKRD
DIKIVFGGAGAKDMVKTIMDGKDPRITADVSYSPKFIYDAIKLTAEARLKGEKLPATTII
PSVLITKENAKEFYHPNSPF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacaactttcaccagacgcctcgcgctcacggccgttgccgccgcagccttcgccagc
ctgcccgcgctcgccgcagagaaggtcaacctcggcgtttcgattcccgcggccacgcac
agcttcatgggcggcatcaactactgggccaaccaggcgaagaaggacctcgagaaggaa
cacaaggacctgaagatcaccatcaagacggccgccaacgcgcccgagcaggccaaccag
ctgcaggacctgtcgacggtgaccaagatcaacgcgctggtcgtgttcccgttcgaatcc
gccgcgctgaccaagccggtcgcgcaggtcaaggccaagggcgcctacgtgaccgtggtc
gaccgcggcctgaccgacaccagcgcgcaggacgcctacgtggccggcgacaacaccgcc
ttcggcaagatcccggccgagtacatcgtgaagcagctcaacggcaagggcaacgtggtg
gcgctgcgcggcatcgcgaccacgctcgacaacgagcgcatggacgccttcaacgccgtg
ctcaagggcagccccgacatcaagctgctggacgccaagtacgccaactggaaccgcgac
gacgccttcaaggtcacgcaggactacctcacgcgcttcaagaacatcgacgccatctgg
gccgccgacgacgacatggccgtgggcgtgctcaaggccatctcgcaggccaagcgcgac
gacatcaagatcgtgttcggcggcgccggcgcgaaggacatggtcaagaccatcatggac
ggcaaggacccgcgcatcacggccgacgtgagctattcgcccaagttcatctacgacgcg
atcaagctcacggccgaagcgcgcctgaagggcgagaagctgccggcgacgacgatcatt
ccttcggtgctgatcacgaaggaaaacgccaaagagttctaccaccccaactcgccgttc
tga
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