Variovorax sp. PMC12: C4F17_21740
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Entry
C4F17_21740 CDS
T05380
Name
(GenBank) pyrimidine utilization regulatory protein R
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_21740
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
C4F17_21740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_13
TetR_C_21
TetR_C_24
DUF2521
Motif
Other DBs
NCBI-ProteinID:
AVQ83366
LinkDB
All DBs
Position
1:4670804..4671511
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AA seq
235 aa
AA seq
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MPKTKALAAASSSTDKPARKRAKPAVRSASAVNRRLRQIEDKRSAILGAALGLFSRFGLH
GTSIDQVAARADVSKSNLLYYFANKEELYVNVLRDLLALWLEPLRGFSAEQDPAEAIGGY
IRRKLVVSRDRPDASRLFCLEMIQGAPLLRDELDRELRSLVEKKSEVIRAWVESGKLAPI
DPHHLIFALWAVTQHYADFGVQVQALTGHTLEDAAFFEETVENVQRIVLQGIAPR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaccaaggcgctggccgcagccagcagcagtaccgacaaaccggcgcgcaag
cgtgccaagccggccgtgcgcagtgcgtcggccgtgaaccggcggctgcgccagatcgag
gacaagcgcagcgcgatcctcggcgcggcgctggggctgttctcgcgcttcggcctgcac
ggcacgtcgatcgaccaagtggcggcgcgtgccgatgtgtcgaagagcaacctgctctat
tacttcgcgaacaaggaagagctctacgtcaacgtgctgcgcgatctgctcgcgctgtgg
ctcgaacctctgcgcggcttcagcgccgagcaggacccggccgaggccatcggcgggtac
atacgccgcaagctggtggtgtcgcgcgaccggcccgatgcatcgcggctgttctgcctt
gaaatgatccagggcgcgccgctgctgcgcgacgaactggaccgcgagctgcgctcgctg
gtggagaagaaatcggaagtgatccgcgcctgggtcgagtccggcaagctggcgccgatc
gatccgcaccacctgatcttcgcgctgtgggcggtgacgcagcactacgcggatttcggc
gtgcaggtgcaggcgctgacggggcacacgctggaagatgcggcgttcttcgaggagacg
gtggagaacgttcagcgcatcgtgctgcagggcatcgcgccgcgctga
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