Variovorax sp. PMC12: C4F17_22090
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Entry
C4F17_22090 CDS
T05380
Name
(GenBank) hypothetical protein
Organism
vam
Variovorax sp. PMC12
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GFIT
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NCBI-ProteinID:
AVQ83431
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Position
1:4740345..4745678
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AA seq
1777 aa
AA seq
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MKARKIQSRAARAPMFSRSSVGTAVAMALIAAASGAQAAETTVGAAYNGSANGTPSVNAG
SNNTANVNAAITGASVGTTSTGTPSTPNPVAMSTSGNLIGATATGNSFANGIQPAPGLPV
NNAATLGVATNSGVINSSVTGSKLAVESSTLQSGSVVNADNTISATTTLNSGSSVVSGAA
PVGAPAQAGTSVLTYPAGAQLFDAKGNIVVTSLQSATGAGSGAVLLNNTVDLMLTANAGN
TITTAAALERNSIAAVLKANSASNTAEIQSGGAPSFAGSAVVANLQANGNGILAVTHSAT
NTGSVVMGIVSGAPAGGANVLQGSLSVQGNAISSAATGNEALGATAGVAGNRILIDDVSI
AGTGTAATAANNSTHNGVGVTSNVNSDLAIVNSQGNIGVTTFAQTVGARVLAGVQSSKSS
QLTLADNSITAAATGNTASSAIASGQNAASFTGTAAVSNQQANSAAGVSAFVMPSIIAAQ
TGESPGNGQTTGSTVTVSDNTTAATAQGNQVTQSLALQAATVALGNGNAVLSGGTATDGR
VSASGAATLTNLQGNYNDGGAAALNLGSQIHLTANGGGAPVANNTLALSGNRQEAVALGS
GASNTLTLTGNSVGTGAGIASVQMNDASSGVGAGLSDPEARIGVDGNLSGGSAAVAGNLQ
RAIAYGNSATNTLGVSAGNLAAAPGPILLGAAASTVTVDLASGLPFSNAAGALPTVRAAY
GVLNDQSVQATVNSAATGPNTFAATVNGNVSAASVSNSGNAFVGAAYGNDAASGVALGLN
NVSGSNASIANVTNTQAVAVTNTKISAIAAGGIVARTTVAGALTNGSVSSTGNTAEALAY
GSRATANTVKVTGNNIDTAGLLLSGATLAGNTLSTTAAFSVQSAQSGQGSVSAQRSGGPE
VQVAVAGAVNNSKVDASGNTTLAGATSNSAANGVSVNAVGVSTTTAVQNLQLTSATVASL
TGQEGAFLTNKDGVQVVLGGSIQGSQVTVDGNTAGGSATGNAAANGIDVKGNTIAVGNGL
PLAGASSLAGTAGAVGDHAVSNIQLVTSPTISSRVAAAFGVDTAPGAAIGGSTLSASGNT
QGARAVANTGSNAIALAATDVSARSALLSAQGSTAAVESRSFQQVFAPASVSGSSVKLSN
NGNTALGVINDVSNKVSVAGGTSGGIGIPAVITQGALPGNTIALGDQVLVNRQSAGTSVA
STADTAIYNEDRLVPANAGLNGSSFTASGNSTYSEASANRATNAASLAGGASQSAKVAVL
NAQDSSAVVTASANNATKLTLTGNSALVGSSATLDGNSTSAAATGSAATNSIDVKSGGAI
AGGLAALPATTTGPASSVTVSADQALANVQLGAGAVSATATGVVGIDTAPLSNVGTSTLG
VTNNSQSAKAVSNTALNSVALAGSNVGARSALQSTQSGTAPVTASSTLELFAPVASSAST
IRISGNSNTALGVMNDAANSLSVSAVNALPPGATGSASLSETGSADNLVASGDHVLSNRQ
SASSTVSSTASTSIHNDDNSAPGTQGLANGALTISGNSTFAEASANRAANTVTVAGSGAQ
GASTGIANVQGSTATVTATAGTVANTTLAGAAPLNGSSVSLDGNTTAALARGNSATNLLE
SGGGSGYGVAATAGSSSLVASPLALNVGASAAILNSQNNTGMVTATSTGTSYQVALNGTG
AGVSNGTVGVTGNALAAQAFGNSATNRVTQTALNTGTPSAAIANYQVNTGAVTATVTSVN
FGVGVTGAVGNSTLRTTGNQITASATGNSSVSTITAR
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacgcaagatccagagccgggccgcacgcgcgcccatgttcagccgcagcagc
gtcggcaccgcagtggcgatggcgctgatagccgccgcttccggtgcgcaggccgcagaa
accactgtcggtgccgcgtacaacggcagcgccaacggtacgccgtcggtgaacgcgggc
agcaacaacaccgccaacgtcaacgccgcgatcaccggcgccagcgtgggcaccacctcc
acgggcacgccgtccacgcccaatccggtggcgatgagcaccagcggcaacctgatcggc
gcgaccgccaccggcaacagctttgccaacggcatccagcccgcgcccggcctgccggtg
aacaacgcggcgacgctgggcgtggcgaccaacagcggcgtgatcaacagcagcgtcacg
ggcagcaagctcgcggtcgagtcgagcacgctgcaaagcggcagcgtggtcaacgccgac
aacaccatctcggccaccaccacgctcaacagcggcagttcggtggtctcgggcgcggcg
ccggtgggcgcgccggcgcaggccggcacctcggtgctgacctatccggcgggcgcgcaa
ttgttcgacgccaagggcaacatcgtcgtgacctcgctgcagtcggccaccggcgcaggc
tccggcgcggtcctgctgaacaacacggtcgacctgatgctgacggccaacgccggcaac
accatcaccaccgcggccgcgctcgagcgcaactcgatcgccgcggtgctcaaggccaac
agcgccagcaacacggccgagatccagtcgggcggcgcgccgtccttcgcgggctcggcg
gtggtggcgaaccttcaggccaatggcaacggcatcctcgcggtcacgcacagcgcgacc
aacacgggctcggtggtcatgggcatcgtgagcggggcgcccgctggcggcgccaacgtg
ctccaggggtcgctgtcggtgcagggcaacgccatctccagcgcggccaccggcaacgag
gcgctcggcgccaccgccggcgtggcgggcaaccgcatcctgatcgacgacgtgagcatc
gccggcaccggcacggccgccacggcggccaacaacagcacgcacaacggcgtgggcgtg
accagcaacgtcaacagcgacctggccatcgtcaacagccagggcaacatcggcgtgacc
accttcgcccagaccgtgggcgcgcgggtgctcgcgggcgtgcagtcgagcaagagcagc
cagctcacgctcgcggacaacagcatcacggcggccgccacgggcaacaccgcctcgagc
gccatcgccagcggccagaacgcggcgtcgttcaccggcaccgccgcggtgtcgaaccag
caggccaattccgccgcgggcgtgtcagccttcgtcatgccatcgatcatcgcggcgcag
accggcgagtcgcccggcaacggccagaccaccggcagcacggtgaccgtgtccgacaac
accacggccgccaccgcgcagggcaaccaggtcacgcagagcctggcgctgcaggcggct
accgtggcgctgggcaacggcaacgcggtgctctcgggcggcaccgccaccgacgggcgc
gtgtcggcaagcggcgcggccaccctcaccaacctgcagggcaattacaacgacggcggc
gccgcggcgctgaacctaggctcgcagattcacctgaccgccaacggcggcggcgcgccg
gtggcgaacaacacgctggcgctgagcggcaaccggcaggaagccgtggcgctcggcagc
ggcgcgtccaacacgctgacgctcaccggcaattcggtgggcaccggcgccggcattgcc
agcgtgcagatgaacgacgcaagctctggcgtgggcgcggggctgtcggatccggaggcg
cgcatcggggtcgacggcaacctctcgggcggctcggccgcggtcgccggcaacctgcag
cgcgccatcgcctacggcaactcggccacgaacacgctgggcgtgagcgcaggcaacctg
gctgcggcaccgggtccgatcctgctgggcgcggcggcctcgacggtcactgtcgacttg
gccagcgggctgccgttcagcaacgccgccggggcactgccgacggtgcgcgcggcctac
ggcgtgctgaacgaccagtcggtgcaggcgacggtcaacagcgcggccaccgggcccaac
accttcgcggcgaccgtcaacggcaacgtgtcggccgccagcgtctcgaacagcggcaac
gccttcgtcggcgccgcctacggcaacgacgcggccagcggcgtggcgctggggctgaac
aacgtgagcggctcgaacgcctcgatcgcgaacgtcaccaacacgcaggcggtggctgtc
acgaacaccaaaatctcggccatcgcggccggcggcatcgtggcgcgcaccaccgtggca
ggcgcgctcaccaacggctccgtgtccagcacgggcaacaccgccgaggcgctggcctac
ggcagccgcgccaccgccaacacggtgaaggtgacgggcaacaacatcgacacggcgggc
ctcttgctgtcgggcgcgaccttggcgggcaacacgctctccaccaccgcggccttcagc
gtgcagagcgcgcaatcgggccagggctcggtgtcggcgcagcgcagcggcgggcccgaa
gtacaggtcgcggtcgcgggcgcggtcaacaactcgaaggtggatgccagcggcaacacc
acgctggccggcgccaccagcaacagcgccgccaacggcgtgagcgtgaatgcggtgggc
gtctcgaccaccaccgcggtgcagaacctgcagctcaccagcgcgaccgtcgcctcgctg
acagggcaggagggcgcgttcctcaccaacaaggacggcgtgcaggtggtgctgggcggg
agcatccagggctcgcaggtcacggttgacggcaacaccgccggcggctcggccaccggc
aacgcggcggccaacggcatcgacgtgaagggcaacaccattgccgtgggcaacggactg
ccgctggccggcgcgagcagcctcgccggtacggcgggcgcggtcggcgaccatgccgtc
tcgaacatccagctggtgacgagcccgacgatctcctccagggtggctgccgcattcggc
gtggacaccgcccccggcgcggcgatcggcggctccacgctgagcgcgtcgggcaacacc
cagggcgcgagggccgtggccaacaccggcagcaacgccatcgcgctcgcggccaccgat
gtctccgcccgctcggcgctgctgtcggcgcagggcagcacggcggcggtggagtcgcgc
tcgttccagcaggtgtttgcgcctgcctcggtgtccggctcttcggtgaagctctcgaac
aacggcaacacggcgctgggcgtgatcaacgacgtgagcaacaaggtgtccgtcgcgggc
ggtacctcgggcgggatcgggattcccgcggtcatcacccagggcgcgctgcccggcaac
accatcgcgctgggcgaccaggtgctggtgaaccgccagtcggccggaacctctgtcgcc
agcaccgccgacaccgcgatctacaacgaagaccgcctggtgcccgccaatgccggcctg
aacggcagcagcttcacggcatcgggcaacagcacctactcggaagcctcggccaaccgc
gcgaccaacgcggcctcgctggcgggcggcgcgtcgcagtcggccaaagtcgcggtgctg
aatgcgcaggacagcagcgctgtcgtgacggccagcgccaacaacgcgacgaagctcacg
ctgaccggcaacagcgccctggtcggcagcagcgccacgctggacggcaacagcaccagc
gccgccgccaccggcagcgcggccaccaacagcatcgacgtgaagagcggcggcgccatc
gccggcggcctggcggcgctgcccgcgaccacgaccggcccggcatcgtcggtgaccgtg
tcggccgaccaggcgctggccaacgtgcagctgggggcgggcgccgtgtcggccaccgcc
acgggcgtcgtcggcatcgacaccgcaccgctgtcgaacgtcggcacctcgacgctgggc
gtgacgaacaacagccagagcgcgaaggcggtgtcgaacaccgcgctcaacagcgtggcg
ctggcgggttcgaacgtgggcgcgcgctcggcgctgcagtcgacgcagtcgggcaccgcg
ccggtgacggcatcgtccacgctggaactgttcgcgccggtggcttcctccgcttcgacc
atccgcatctccggcaacagcaacacggcgctgggcgtgatgaacgacgcggccaactcg
ctgagcgtgagcgcggtcaacgccttgccgccgggcgcgacgggctcggcctcgctgagc
gagaccggcagcgccgacaacctcgtggccagcggcgaccatgtgctgtcgaaccgccag
tcggcttcctcgacggtttccagcaccgccagcacctcgatccacaacgacgacaacagc
gcgcccggtacgcaaggcctggccaatggcgcgctcacgatctccggcaacagcaccttc
gccgaggcctcggccaaccgcgcggccaacaccgtcacggtggcgggcagcggggcgcag
ggggccagcaccggcatcgcgaacgtgcagggcagcacggcgaccgtgacggcgacggcc
ggcacagtggccaacaccaccctggccggcgcggcgccgctcaacggcagcagcgtttcg
ctcgacggcaacaccacggccgctctggcgcgcggcaactcggcgaccaacctgctcgaa
tccggcggcggcagcggctacggcgtggcggccacggcgggctcgtccagcctcgtcgcg
tccccgctggcgctcaacgtgggcgccagcgcggcgatcctcaacagccagaacaacacg
ggcatggtcacggccaccagcacgggcacgagctaccaggtggcgctcaacggcaccggc
gcgggcgtgtcgaacggcacggtcggggtcaccggcaacgcgctggcggcgcaggccttc
ggcaacagcgcgaccaaccgcgtaacgcagacggcgctgaacaccggcacgccgagcgcg
gccatcgccaactaccaggtcaacaccggcgcggtgacggccacggtgacgagcgtgaac
ttcggggtcggcgtgacgggcgcggtgggcaacagcacgctgcgcaccacgggcaaccag
atcaccgcatcggcgactggcaactcgtcggtctcgacgatcaccgcgcgctga
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