Variovorax sp. PMC12: C4F17_22305
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Entry
C4F17_22305 CDS
T05380
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_22305
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
C4F17_22305
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_21
TetR_C_29
TetR_C_24
Asparaginase_C
Motif
Other DBs
NCBI-ProteinID:
AVQ84757
LinkDB
All DBs
Position
1:complement(4790889..4791521)
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AA seq
210 aa
AA seq
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MPAPDGPLSRARPGRERIMAAIRTAAVAEFSLHGLKGTSTQAIAARAGLTKPQLHYYIAG
KEELYEELLMQVLHAWKVVFSFEDASDPATVLGDYIRKKLDHAIDSPEMSRIFTREILDG
GRNLDRYWPNARAWTQKKVDVINGWIARGQMRPLDARILLMHIWAMTQSYADYAIQTRVM
LGLPPDAPIDREPIARELVAFVLGGCGIKA
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcccgacggcccgctgtcgcgcgcgcgcccgggccgcgaacgcatcatggcg
gccatccgcacggcagcggtggcggagttcagcctgcacgggctcaagggcacatcgacc
caggccatcgcggcgcgcgcgggcctgaccaagccccagctgcactactacatcgcgggc
aaggaagagctctacgaagagctgctgatgcaggtgctgcatgcgtggaaggtggtgttc
tccttcgaggacgcgagcgacccggccacggtgctgggcgactacatccgcaagaagctc
gaccacgccatcgacagccccgagatgtcgcgcatcttcacgcgcgagatcctcgacggc
gggcgcaacctcgaccgctactggcccaatgcgcgggcgtggacgcagaagaaggtcgac
gtcatcaacggctggatcgcgcgcgggcagatgcgcccgctcgatgcgcgcatcctgctg
atgcacatctgggccatgacccagagctacgccgactacgcgatccagacgcgcgtgatg
ctcggcctgccgcccgacgcaccaatcgaccgcgaaccgatcgcgcgcgaactggtggcg
ttcgtgctgggcggctgcggcatcaaggcgtag
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