Variovorax sp. PMC12: C4F17_22535
Help
Entry
C4F17_22535 CDS
T05380
Name
(GenBank) acyl-CoA dehydrogenase
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00071
Fatty acid degradation
vam00280
Valine, leucine and isoleucine degradation
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01212
Fatty acid metabolism
Module
vam_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
C4F17_22535
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C4F17_22535
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
C4F17_22535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Motif
Other DBs
NCBI-ProteinID:
AVQ83506
LinkDB
All DBs
Position
1:4837332..4838501
Genome browser
AA seq
389 aa
AA seq
DB search
MNFSLNDDQRSLVAAIERLCEDFPADYWRDHDDRAVFPHEFHRAVAESGWLGIAMPEAQG
GAGLGITEAALMMRAISASGAGMSGASSVHMNIFGLNPVVVFGTEEQRQRFLPPLIAGTE
KACFAVTEPDAGLDTTSLKTQAVRQPDGGYLLHGRKIWISTAQVADRMLILTRTTPLDQV
KKPTQGLTLFYTPLDRSKVEVREIHKLGRAAVDSNMLFIDGLAVPEEDRIGEEGRGFEYI
LHGLNPERILIAAEAIGIGRAALRIASQYAQERVVFGRPIGQNQGVAHPLARAWANVEAA
DLMMLKAATLYDAGEPCGVEANAAKYLAAEAAHDACQNAVLTLGGMGYAKEYHVERLLRE
SYIPRIAPVSPQMILNFIAEKAMGLPKSY
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttccctgaacgatgaccagcgctcgctggtcgcggccatcgagcgcctgtgc
gaagacttcccggccgactactggcgcgaccatgacgaccgcgccgtgttcccgcacgag
ttccaccgcgccgtggccgagagcggctggctcggcatcgccatgcccgaggcacagggc
ggcgcgggcctcggcatcaccgaggcggcgctgatgatgcgtgccatcagtgcgtcgggc
gcgggcatgtcgggcgcgtcgtcggtgcacatgaacatcttcgggctcaacccggtggtg
gtgttcggcacagaggaacagcgccagcgcttcctgccgccgctcatcgccggcaccgag
aaggcctgcttcgccgtgaccgagcccgatgcggggctcgacaccaccagcctcaagacg
caggcggtgcgccagcccgatggcggctacctgctgcacggccgcaagatctggatctcg
accgcgcaggtggccgaccgcatgctgatcctcacgcgcaccacgccgctcgaccaggtg
aagaaacccacgcagggcctcacgctcttctacacgccgctggaccgcagcaaggtcgag
gtgcgcgagatccacaagctcggccgcgcggcggtggactccaacatgctcttcatcgac
gggctcgcggtgcctgaagaagaccgcatcggcgaggagggcaggggcttcgaatacatc
ctgcacgggctcaaccccgagcgcatcctcatcgcggcggaagccatcggcatcggccgc
gcggcgttgcgcatcgcctcgcagtacgcgcaggagcgggtcgtgttcggccggcccatc
ggccagaaccagggcgtggcgcatccgctggcgcgtgcctgggccaacgtggaggcggcc
gacctgatgatgctcaaggccgccacgctgtacgacgcgggagagccctgcggcgtcgag
gccaacgccgccaagtacctcgcggccgaggctgcgcacgacgcctgccagaacgcggtg
ctcacgctcggcggcatgggctatgccaaggaataccatgtggagcggctgctgcgcgag
agctacataccgcgcatcgcgccggtgagcccgcagatgatcctgaacttcatcgccgag
aaggcgatggggctgcccaagtcgtactga
DBGET
integrated database retrieval system