Variovorax sp. PMC12: C4F17_22545
Help
Entry
C4F17_22545 CDS
T05380
Name
(GenBank) homoserine/homoserine lactone efflux protein
KO
K05834
homoserine/homoserine lactone efflux protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_22545
Transporters [BR:
vam02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C4F17_22545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysE
TerC
Motif
Other DBs
NCBI-ProteinID:
AVQ83508
LinkDB
All DBs
Position
1:4839563..4840204
Genome browser
AA seq
213 aa
AA seq
DB search
MDLNVWLAFLVASCVIAVSPGSGAVLSMSHGLSYGVRRTTATIVGLQLGLAVILLVAGLG
VGAVLTASATAFTVIKVVGACYLLWLGWRQWRAPVAPAASAEGGEAAREPDLTAPQRVLR
GFLTNVTNPKGIVFMAAVLPQFIQPTRPLWLQLLVLLATTVMVDVTVMHGYAWLAARLQG
VLRSVRARRAQNRVFGGVLMSMGAFLFLFKRSA
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaatgtctggctcgcattcctggtggcgagttgcgtcatcgcggtgtcgccc
ggttcgggcgccgtgctcagcatgagccacggcctcagctacggcgtgcggcgcaccacc
gcgaccatcgtcggcctgcagctggggctggcggtgatcctgctggtggccggcctcggc
gtgggcgcggtgctcaccgcctcggccaccgcgttcacggtgatcaaggtggttggcgcg
tgctacctgctgtggctgggctggcgccagtggcgcgcgcccgtggcgccggcggcgagt
gcagaaggcggcgaggccgcgcgcgagcccgacctcacggcgccgcagcgcgtgctgcgc
ggctttctcaccaacgtgaccaaccccaagggcatcgtcttcatggccgcggtgctgccg
cagttcatccagccgacgcgcccgctgtggctgcagctgctggtgctgctggccacgacg
gtgatggtcgacgtgaccgtgatgcacggctacgcctggctggccgcgcggctgcagggc
gtgctgcgcagcgtgcgtgcccggcgcgcgcagaaccgcgtcttcggcggcgtgctcatg
agcatgggcgccttcctgttcctcttcaagcgaagcgcctga
DBGET
integrated database retrieval system
