Variovorax sp. PMC12: C4F17_22765
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Entry
C4F17_22765 CDS
T05380
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
vam
Variovorax sp. PMC12
Pathway
vam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C4F17_22765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vam03400
]
C4F17_22765
DNA repair and recombination proteins [BR:
vam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C4F17_22765
RecFOR pathway proteins
C4F17_22765
BRITE hierarchy
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Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH
IMS_HHH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AVQ83550
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All DBs
Position
1:4886985..4887557
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AA seq
190 aa
AA seq
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MIGKLTGTLAERNPPQVVVDCNGVGYEVDVPMSTFYNLPNVGAKVSLLTHFVVREDAQIL
YGFGTAEERAAFRQLIKITGVGPRTALGLLSGMSVGELAQAITTQELGRLVKIPGIGKKT
AERLLLELKGKLGADIGLPAHAASDAQADILQALIALGYSDKEAALALKALPKDATVSEG
IKLALKSLAK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgataggcaaactcaccggcacgctggccgaacgcaacccgccgcaggtggtggtggac
tgcaacggcgtcggctacgaggtcgatgtgccgatgagcacgttctacaacctgccgaac
gtcggcgcgaaggtgtcgctgctcacgcacttcgtcgtgcgcgaggacgcgcagattctc
tacggcttcggtaccgccgaggagcgtgcggcttttcgccagctcatcaagatcaccggc
gtggggccgcgcaccgcgctgggcctgctgtcgggcatgagcgtgggcgaactggcgcag
gcgatcaccacccaggagctgggccggctcgtgaagatcccgggcatcggcaagaagacc
gccgaacggctgctgctggagttgaagggcaagctcggcgccgacatcggcctgccggcg
catgcggcctccgacgcgcaggccgacatcctccaggcgctgatcgcgctgggctacagc
gacaaggaagccgcgctcgcgctgaaggctttgccgaaggacgcgacggtgagcgagggc
atcaagctcgcgctgaagtcgctggccaagtga
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