Variovorax sp. PMC12: C4F17_23175
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Entry
C4F17_23175 CDS
T05380
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_23175
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_23175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_23175
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_23175
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Cytochrom_C
Motif
Other DBs
NCBI-ProteinID:
AVQ83620
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All DBs
Position
1:4969990..4971189
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AA seq
399 aa
AA seq
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MKTLRLYKTLLAAAAFAAFTAGASAQDIKLGYNGDLSASPSAQSGQAAVLGMEAAIADIN
AAGGVLGKKLALVTRDDVSAPPKSIQNMSDLIDNEKVVAVFGPTNSGNAMAWKHIANQKK
IPVLGNVGSGTDITKPMSPGADNYMFRVSMVDREQVAALMAYVKKNAAGSKVVGLMAETT
GYGQGGLKDMEEIAKLQDIKIAATERFGVGDTDMTSQLSKMKAANVDTVVVWAQGTPIAQ
LVRSMEKINYFPLTLTSWAADNITFYDAAGKALAEKPIFMRTVSETRTPAQQKLFDRIGS
KLKAPGSFSFALHGYDSMQLLAQAMKQANSTDGAAVRAALEDLKTPVQGVLKTYDKPFSK
TNHEALTAKDLVWIRWKDGKLLPYSDALIDGLKPADFKQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacccttcgtctgtacaagaccctgctcgccgcggctgcgttcgccgccttcacc
gccggtgcgtcggcgcaagacatcaagctgggctacaacggcgacctgtcggcatcgccc
tcggcgcagagcggccaggccgcggtgctgggcatggaagcggccattgccgacatcaac
gccgccggcggcgtgctgggcaagaagctggcgctggtcacgcgcgacgacgtgtcggct
ccgcccaagtcgatccagaacatgagcgacctgatcgacaacgagaaggtggtcgccgtg
ttcggccccaccaactcgggcaacgcgatggcgtggaagcacatcgccaaccagaagaag
attccggtgctgggcaacgtgggttcgggcaccgacatcaccaagcccatgagccccggc
gccgacaactacatgttccgcgtctcgatggtcgaccgcgaacaggtggccgcgctcatg
gcctacgtgaagaagaacgccgccggctccaaggtggtgggcctcatggccgagaccacc
ggctacggccagggcggcctgaaggacatggaagaaatcgccaagctgcaggacatcaag
atcgcggccaccgagcgcttcggcgtcggcgacaccgacatgacctcgcagctgagcaag
atgaaggccgccaacgtcgacaccgtggtggtgtgggcgcagggcacgcccatcgcgcag
ctggtgcgcagcatggagaagatcaactacttcccgctgacgctcacctcctgggccgcc
gacaacatcaccttctacgacgcggccggcaaggcgctggccgagaagccgatcttcatg
cgcaccgtgagcgagacccgcacgcccgcgcagcagaagctgttcgaccgcatcggcagc
aagctgaaggcgccgggctcgttctccttcgcgctgcacggctatgactcgatgcagctg
ctggcccaggccatgaagcaggccaacagcaccgacggcgccgccgtgcgtgccgcgctc
gaagacctgaagacgccggtgcagggcgtcctcaagacctacgacaagcccttcagcaag
accaaccacgaagccctgaccgccaaggacctggtgtggatccgctggaaggacggcaag
ctgctgccctacagcgacgcgctgatcgacggcctgaagccggccgacttcaagcagtaa
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