Variovorax sp. PMC12: C4F17_23190
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Entry
C4F17_23190 CDS
T05380
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_23190
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_23190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_23190
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_23190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_ATPase
AAA_29
SMC_N
BCA_ABC_TP_C
AAA_23
RsgA_GTPase
AAA_22
AAA_27
AAA_15
AAA_16
NACHT
AAA_25
NB-ARC
MMR_HSR1
Dynamin_N
AAA_33
AAA_14
SbcC_Walker_B
nSTAND1
AAA_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AVQ83623
LinkDB
All DBs
Position
1:4973952..4974662
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AA seq
236 aa
AA seq
DB search
MLKIESVKVSYGAIEAVKGVSLEVRAGEVVTIIGANGAGKSTLLKSIVGLEPVAEGRVLI
DGNDCTHVPSHKRVGLGVALSPEGRGVFPDQTVRENLMLGAYSRRNDKAFVESAIEREFA
RFPRLKERQHQPSGTLSGGEQQMLAIARALMSEPRLLLLDEPSLGLAPLIIKDIFDAIRQ
LRSSGLTILLVEQMAKQALGVADRAYVLETGCITLEGSGRELLDNPKVKSAYLGTH
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatcgaatcggtgaaggtctcgtacggcgccatcgaggccgtcaagggcgtg
agcctggaagtgcgcgcgggcgaggtcgtcaccatcatcggcgccaacggcgccggcaag
agcacgctgctcaagagcatcgtcgggctggagcccgtggccgagggccgcgtgctgatc
gacggcaacgactgcacccacgtgccttcgcacaagcgcgtgggcctgggcgtggcgctg
tcgcccgaaggccggggcgttttccccgaccagacggtgcgcgagaacctgatgctcggc
gcctactcgcgccgcaacgacaaggccttcgtggagagcgccatcgaacgcgagttcgcg
cgcttcccgcggctgaaggagcgccagcaccagccttcgggcacgctgtcgggcggcgag
cagcagatgctggccattgcccgcgcgctcatgagcgagccgcgcctgctgctgctcgac
gagccctcgctggggctcgcgccgctcatcatcaaggacatcttcgacgccatccgccag
ctgcgcagttcgggcctgaccatcctgctggtggagcagatggccaagcaggcgctgggc
gtggccgaccgcgcctatgtgctggaaaccggctgcatcacgctcgaaggctccggccgc
gagctgctcgacaaccccaaggtgaagtccgcgtacctcggcacgcactga
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