Variovorax sp. PMC12: C4F17_23300
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Entry
C4F17_23300 CDS
T05380
Name
(GenBank) hypothetical protein
Organism
vam
Variovorax sp. PMC12
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AVQ83641
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Position
1:4996820..5000734
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AA seq
1304 aa
AA seq
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MRDGVRIPVDGNQTLIAGDRVIVPQDGHANVLFPGSATNKAPLAGVFTGGTDATIGSTKL
PGGLEQVNVDVASGDLQVTPPDSDADAAALAVTKKLAAGSGIGLGEFALGALGAAALGAA
LGGGGGGGTSGIPLLVSSGDPNTPTTPTTPTTPDSDADADADADADADADGDADADADSD
ADADADADSDADADADADSDADADADADSDADADADSDSDADADADSDADADADADSDAD
ADADADSDADADSDADADADADADADGDHLLDPGDGLIGHVIDDVSGALGLGGALTPVTN
AIDGVTDVVDNVLSPLLGSTFTPNNPNEFDPVDNTVADVTHLVGGALSPALDGLLGAGAT
NQILGSLNQQVDYLTDAVHNGLENLIGDHGIVTGLTGALGLGAVTGQLLGDDGVIGDVLG
NVLGEGSLVSGLLDDQGLVGGLLGQDGLVGGLLGDDGAVGGLLGNVLGSDGLVGGLLGST
GAVGGLTGGLLGEQGLLGGLLGDGSAVGGLLGDDGLVGGLLGEDGALSNLLGSDGLTGQL
LGHGGLVDSLLGEHGVVSGLITDSPLGGLLGGDNGLLGGAVGGLLGDNGVVGGLLGDDGA
LGGLLSNDGLLGGLLGDNGPVGGLLGGDGLLGGVLGDDGLLGGVLGNDGLLGGVVGDNGL
VGGLLGGNGPVGGLLGNDGLLGGLLGDGGLGGVLGADGLGGGLLGSDGLVGGLLGDDGLV
GGVLGNDGLLGGVLGGVVGGIGNGGTPGTGAALLDPVDSIVGSVANGLNHGVLGDLGLGD
VLAPVVGLTDSVTDTVDGLLGPVLGTSFNSNSPNVLDPVDGVVSQVTDGVGGLLSPLADQ
VLGAGTTTAVLNAVDTQVDYLTDGVANLLNGGVLGGVLGGDGGLLGGVLGGDGGLLGGVL
GDDGLLGGVLGGDGGLLGGVLGDNGLLGGVLGGDGGLLGGVLGGDGGLLGGVLGDDGLLG
GVLGGDGGLLGGVLGDDGLLGGVLGGDGGLLGGVLGDNGVLGGVLGGSEGGLLGGVLGDN
GVLGGVLGGSEGGLLGGVLGDNGVLGGVLGGSEGGLLGGVLGDNGVLGGVLGGSEGGLLG
GVLGDNGVLGGVLGGSEGGLLGGVLGDNGVLGGVLGGSEGGLLGGLLGDNGVLGGVLGGS
EGGLLGGVLGSDGLVGGLLGGGSGSDGPLGGVLGNDGLVGSLLGNDGLVGGLLGGLLGGS
NPVANILQPATSAVSSVTDTVSSVASNATHAGSDATAPVTDILAGSSHAAAPVTDVVSSV
VNTVEHVAAPLVNDVVTPITSLVEHSPAGSALSPVTNILHGLLG
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacggtgtccgcattccggtcgatggcaatcagaccctgattgccggtgaccgc
gtgatcgtgccgcaggacggccacgccaacgtgctgttccccggctcggccaccaacaag
gcgccgctggccggcgtcttcaccggcggcaccgacgccaccatcggctcgaccaagctg
ccgggcggcctcgaacaagtgaatgtggatgtcgcctcgggcgacctccaagtgaccccg
cccgacagcgacgccgacgcggccgcgctggccgtgaccaagaagctcgccgccggcagc
ggcatcggcctgggcgaattcgcgctgggcgcgctgggtgccgcggcgctgggtgccgcg
ctcggcggcggcggcggcggcggcacgtccggcatcccgctgctcgtgtcttccggcgat
ccgaacacccccacgaccccgacgacgcccaccacccccgactccgatgcggacgccgac
gccgatgccgacgcggatgccgatgccgacggcgacgcggacgcggatgccgactcggat
gcggacgccgatgccgatgccgactcggatgccgatgcagacgctgacgccgactcggat
gcagacgccgacgccgacgctgattcggatgccgacgcggatgccgactccgactcggat
gcagacgcagatgccgactccgatgcagacgctgacgcggacgccgattcggatgccgac
gcagacgccgacgccgattcggacgccgatgccgactcggatgcggacgcagacgcggac
gcagacgccgacgccgatggcgaccacctcctcgacccgggcgacggcctcatcggccat
gtcatcgacgacgtgagcggtgcgctcggcctcggcggtgcgctcacccccgtgaccaac
gcgatcgacggcgtgaccgacgtggtcgacaacgtgctgtccccgctgctcggcagcacc
ttcacgcccaacaaccccaacgagttcgacccggtcgacaacaccgtcgccgacgtcact
cacctggtgggcggcgcgctgagcccggcgctcgacggcctgctgggtgccggcgccacc
aaccagatcctcggctcgctgaaccagcaggtcgactacctgaccgacgcggtgcacaac
ggcctggagaacctcatcggcgaccacggcatcgtgaccggcctgaccggcgccctgggc
ctcggcgcggtcaccggccagctgctgggcgatgacggcgtcatcggcgacgtgctcggc
aacgtgctgggcgaaggcagcctcgtgtccggcctgctcgacgaccagggcctggtcggc
ggcctgctcggccaggacggcctggtcggtggcctgctgggcgacgacggcgccgtcggc
ggtttgctcggcaacgtgctgggcagcgacggcctcgtgggcggcctgctcggcagcacg
ggcgccgtcggcggcctcaccggcggcctgctgggtgaacagggcctgctgggcggcctg
ctcggtgatggcagcgcggtgggtggcctgctcggtgacgacggcctcgtcggcggcctg
ctcggcgaggacggcgcgctctccaacctgctgggcagcgacggcctcaccggccagctg
ctgggccacggcggcctggtcgacagcctgctcggcgagcacggcgtggtgtccggcctg
atcaccgacagcccgctcggcggcctgctcggcggcgacaacggcctgctgggcggtgcc
gtcggcggcctgctcggtgacaacggcgtggtcggcggcctgctgggcgacgacggtgcg
ctgggcggcctgctcagcaacgacggcctgctgggtggcctgctcggcgacaacggcccg
gtcggcggcctcctgggcggcgacggcctgctcggcggtgtgctcggcgacgacggcctg
ctgggtggcgtgctcggcaacgacgggctcctgggcggcgtggtcggcgacaacggcctg
gttggcggcctcctgggcggcaacggcccggtgggcggcctgctcggcaacgacggactc
cttggcggcctgctgggcgacggcggcctgggcggcgtgctcggcgccgacggcctcggc
ggcgggctgctcggctctgacggcctggttggcggcctgctgggcgacgacggtctggtc
ggtggcgtgctgggcaacgacggcctgctgggtggcgtgctcggcggcgtggtgggcggc
atcggcaacggcggcacgccgggcaccggcgcggcgctgctcgacccggtcgacagcatt
gtcggcagcgtggccaacggcctgaaccacggcgttctcggcgacctgggcctgggcgac
gtgctcgcgccggtggtcggcctcacggacagcgtgacggacacggtcgacggcctgctc
ggcccggtgctcggcacctccttcaactcgaacagccccaacgtgctcgacccggtcgat
ggcgtggtgagccaggtgaccgacggcgtcggcggcctgctgagcccgctggccgaccag
gtgctcggcgcgggcacgacgaccgcggtgctgaatgccgtcgatacgcaagtggactac
ctcacggacggcgtggcgaacctgctgaacggcggcgtgctgggtggtgtgctcggcggc
gacggtggcctgctcggcggcgtgctcggtggtgacggtggcctgctcggcggtgtgctg
ggtgacgacggcctgctgggcggcgtgctcggcggtgacggtggcctgctgggcggtgtg
ctgggtgacaacggcctgctgggcggtgtgctcggcggtgacggtggcctgctgggcggt
gtgctcggcggcgacggcggcctgctcggcggtgtgctgggtgacgacggcctgctgggt
ggcgtgctcggcggcgacggtggcctgctcggcggcgtgctgggtgacgacggcctgctg
ggcggcgtgctcggcggtgacggtggcctgctcggcggtgtgctgggcgacaacggcgtc
ctgggtggcgtcctcggcggcagcgaaggcggcctgctcggcggcgtgctgggtgacaac
ggcgtgctgggtggcgtgctcggcggcagcgaaggcggcctgctcggcggcgtgctgggc
gacaacggcgtcctgggcggtgtcctcggcggcagcgaaggcggcctgctcggcggcgtg
ctgggcgacaacggcgtgctgggtggcgtgctcggcggcagcgaaggcggcctgctcggc
ggcgtgctgggcgacaacggcgtcctgggcggtgtcctcggcggcagcgaaggcggcctg
ctcggcggcgtgctgggcgacaacggcgtgctgggtggcgtgctcggcggcagcgaaggc
ggcctgctcggcggcttgctgggcgacaacggcgtcctgggcggcgtcctcggcggcagc
gaaggcggcctgctcggcggcgtgctgggcagcgacggcctcgtgggcggtctgctcggc
ggcggcagcggctcggacggcccgctcggcggcgtcctcggcaacgacggcctggtcggc
agcctgctgggcaacgacggcctcgtcggcggcctgctcggtggcctgctgggcggcagc
aacccggtagccaacatcctgcagccggcgacgagcgccgtcagcagcgtgaccgacacc
gtcagctccgtggcctcgaacgccacgcacgcgggttccgacgcaacggcgccggtgacc
gacatcctggcgggctcgtcgcatgcggccgcaccggtgaccgatgtcgtcagcagcgtg
gtgaacaccgtggagcacgtggccgcgccgctggtgaacgacgtcgtgacgccgatcacc
agcctggtcgagcacagcccggccggcagcgcgctgtcgccggtgaccaacatccttcac
ggcctgttgggctga
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