Variovorax sp. PMC12: C4F17_23460
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Entry
C4F17_23460 CDS
T05380
Name
(GenBank) branched-chain amino acid ABC transporter permease
KO
K01998
branched-chain amino acid transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_23460
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_23460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_23460
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_23460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AVQ83671
LinkDB
All DBs
Position
1:5034674..5035714
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AA seq
346 aa
AA seq
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MTNMPPTLIAVERATAASRAALAVGIALVLVAASLPWWGESSWMREFVEIACYFIFAMMW
NLLAGYGGMVSIGQQAFFGFGGYVMLMLGNFAGVNPFVAIPLGALAAGLVAIPVSFVAFR
LSGGYFAIGTWVIAEVFRLSFANVSAVGGGSGTTLTALRGIEKATRESTTYWMALACVVA
AVALVYLFLRSKRGLALLAIRDNEVAAESQGIPVARMKLAVYVVAAFGAGLAGALYFVGN
LRIGPDAAFSVNWTAFAIFMVVIGGIGRIEGPLVGALIFWALNKFLSDYGTWYLLGLGLL
AILVTLFFKQGLWGYAQQRWGWSLFPTQRKLSPVHAPAGVKASSRC
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacatgcctcccacactcatcgccgtggagcgcgccaccgccgcgagccgcgcc
gcgctggccgtcggcattgccctggtgctcgttgcggccagcctgccttggtggggcgag
tcgagctggatgcgcgaattcgtcgagattgcctgctacttcatcttcgcgatgatgtgg
aacctgctcgccggctatggcggcatggtgagcatcgggcagcaagccttcttcggcttc
ggcggctacgtgatgctgatgctgggcaacttcgcgggcgtcaatccgttcgtggcgata
ccccttggggcgctggcggcggggctggtcgccattccggtgtccttcgtcgcgttccgg
ctttcgggcgggtactttgccatcggcacatgggtcatcgcggaagtgttccggctgagc
ttcgcgaacgtgtcggccgtgggcggcggctcgggcaccacgcttaccgcgctgcgcggc
atcgagaaggccacccgcgaaagcaccacctattggatggcgctggcctgcgtggtcgcg
gccgtcgcgctggtgtacctgttcctgcgcagcaagcgcggccttgcgctgctggccata
cgcgacaacgaggtggcggcggagtcgcagggtattccggtcgcgcgcatgaagctggcg
gtgtacgtggtcgcggccttcggcgctgggctcgcgggtgcgctgtacttcgtgggcaac
ctgcgcatcggccccgatgcggcgttcagcgtcaactggacggccttcgccatcttcatg
gtggtcatcggcggcatcggccgcatcgaagggccgctggtcggcgcgctcatcttctgg
gcgctcaacaagttcctgagcgactacggcacctggtatctgctggggctggggctgctc
gcgattctcgtcacgctgttcttcaagcagggcctgtggggctacgcgcagcagcgctgg
ggctggtcgctgtttccgacgcagcgcaagctgtcgccggtgcacgcgccggccggcgtc
aaggcttcttcacggtgttga
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