Variovorax sp. PMC12: C4F17_23965
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Entry
C4F17_23965 CDS
T05380
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_23965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_23965
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C4F17_23965
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_16
PRK
AAA_21
AAA_29
AAA_22
SMC_N
DUF87
Zeta_toxin
AAA_13
Sigma54_activat
DEAD
nSTAND3
Sigma54_activ_2
AAA_23
Mg_chelatase
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AVQ83763
UniProt:
A0A2P1VF26
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All DBs
Position
1:complement(5128882..5129712)
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AA seq
276 aa
AA seq
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MSQKTAVPPLLQVTDLVRHYALPREKLFGPPPTVKALNGVSFDVQAGKSVGIVGESGSGK
STIARLVMALDTPTSGSVRLEGRDLHTLPRAELRTARRDFQMVFQDPYGSLDPRQTVARI
VAEPLEALAETSRAEQRERASEALAAVGLRTTDMDKYPHEFSGGQRQRIAIARALITRPK
LIVADEPVSALDVSVQAQVLNLMQDLQQQFGISYLLISHDLAVVNHLCDDVCVVWKGKIV
EQGPPAELFRHAQHPYTRTLLEAVPRTPTGGTLLPA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaagaccgccgttccaccgctgctgcaggtcaccgacctcgtgcgccactac
gcgctgccgcgtgaaaaactcttcggcccgccgccgaccgtgaaggcactcaacggcgtg
agcttcgacgtgcaggccggcaagagcgtgggcatcgtcggtgaatcgggctcgggcaag
tcgaccatcgcgcgcctggtgatggcgctggacacgccgacctccggcagcgtgcgcctc
gaaggccgcgacctgcacacgctgcccagggccgagctgcgcacggcgcggcgcgatttc
cagatggtgttccaggacccgtacggttcgctcgacccgcgccagaccgtggcgcgcatc
gtggccgagccgctggaggcgctggccgagaccagccgcgccgaacagcgcgagcgcgca
tcggaggcactcgcagccgtcggcttgcgcaccaccgacatggacaagtacccgcacgag
ttctcgggcggacagcgccagcgcatcgccatcgcgcgtgcactgatcacacgccccaag
ctcatcgtggccgacgagccggtgagcgcgctcgacgtgtcggtgcaggcccaggtgctc
aacctgatgcaggacctgcagcagcagttcggcatcagctacctgctcatcagccacgac
ctcgcggtggtcaaccacctgtgcgatgacgtgtgcgtggtgtggaaaggcaagatcgtg
gagcaaggcccgcccgccgagctgttccggcatgcgcagcacccctacacgcgcacgctg
ctcgaagccgtgccgcgcacgcccaccggcggcacgctgctgccggcctga
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