Variovorax sp. PMC12: C4F17_24445
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Entry
C4F17_24445 CDS
T05380
Name
(GenBank) hypothetical protein
KO
K07165
transmembrane sensor
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_24445
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GFIT
Motif
Pfam:
FecR
DUF4880
FecR_C
Motif
Other DBs
NCBI-ProteinID:
AVQ83848
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Position
1:complement(5219677..5220729)
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AA seq
350 aa
AA seq
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MTEAERIESAAADWLARRDSGSWTDTDQQQLDAWIAESVAHRIAWLRLSSVWERADRLGA
LRTPAAPAAAAAAPGVIPIPLPAPAPARPGARGHRAFQLPRFSTQRIAASMLIAAAGCSW
LGWKYTQDWRSEHYATAVGARQSVSLPDGSVLTLNTATHLRTVVNANGRKVWLEDGEAYF
DIAHDKAHPFVVIAGDRRITVLGTRFVVRRDGEQVNVVVEEGRVQIASASSDRGTDKSAK
SGEPTVLVRNQAAVASANNVLVISKAPKQIDDELSWRKGKLVFDQTSLGDAAAQFNRYNT
RKLVIADPALARIRIGGSFDANNMGGFVALLKQGFGLSVQESGNETRISN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagccgaacgcatcgaatccgcagccgccgactggctggcgcgccgcgacagc
ggcagctggaccgacaccgaccagcagcagctcgacgcctggattgccgagtccgtcgcg
caccgcatcgcgtggctgcgcctgtccagcgtctgggagcgtgccgaccggctcggcgcc
ctgcgcacgccagcggcacccgcggccgcggcggcggcgcccggggtcattcccatcccg
ctgccggcacccgcgcctgcgcgccccggcgctcgtgggcaccgcgcctttcaactgccg
cgcttttcaacccagcgcatcgcggccagcatgctgatcgcggccgccggctgcagctgg
ctgggctggaagtacacgcaggactggcgcagcgagcactacgccaccgccgtgggcgca
cgccagtcggtctcgctgcccgacggctcggtgctcacgctgaacaccgccacccacctg
cgcactgtcgtgaatgccaacggacgcaaggtgtggctcgaagacggcgaggcctacttc
gacatcgcgcacgacaaggcgcaccccttcgtggtgatcgccggcgaccgccgcatcacc
gtgctgggcacgcgcttcgtggtgcggcgcgacggcgagcaggtgaacgtggtggtcgag
gaaggccgcgtgcagatcgcatcggccagcagcgaccgcggcaccgacaagagcgcgaag
agcggcgagcccaccgtgctcgtgcgcaaccaggcggccgttgccagcgcgaacaacgtg
ctggtgatctcgaaggcgccgaagcagatcgatgacgaactgagctggcgcaagggcaag
ctggtgttcgaccagacctcgctgggcgacgcggccgcgcagttcaaccgctacaacacg
cgcaagctggtgatcgccgatcccgcgctcgcgcgcatccgcatcggcggcagcttcgat
gccaacaacatgggcggcttcgtggcactgctgaagcagggcttcggtctttcggtgcag
gaaagcggcaacgaaacaagaatttcaaactag
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