Variovorax sp. PMC12: C4F17_24475
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Entry
C4F17_24475 CDS
T05380
Name
(GenBank) GntR family transcriptional regulator
Organism
vam
Variovorax sp. PMC12
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
HTH_Crp_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AVQ83852
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Position
1:complement(5224084..5225424)
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AA seq
446 aa
AA seq
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MAEARYKQLVDELAAEIRAGRLKPGTRLPTHRRLAERHGLALVTASRVYAELEAMGLVSG
EVGRGTFVREATIPRDKGIDQQAVAAGQVDLNFNYPSLPGQAELLRGALRQLAAGGELDA
MLRYAPHGGRMHERACVARHLASRGLDALDPSRVLLVDGAQHGLAVTAMALLQPGDVVAV
DALTYPGFKVLAEAHRLELAPIPASGAGPDLDALERLCARRRVRAIYAMPTLHNPLGWVM
STSRRRRLASIARRHGLLVIEDAAYAFLADDPQDMPPPPLATLLPESTVYVSGLSKNVAT
GLRVGFVVAPQAWVPKIERAIRATTWCTPGVTTAIACAWLEDGTVERLESEKRHDAAVRQ
AIVDETLAGMRFVRHPSSYFVWLPLPEETRADHVSAALMREGISVSTAEPFATSKHVPHA
LRLALGSVGLPSLRSALLTVRRVIGE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagcccgctacaagcaactggtcgatgaactcgccgccgagatccgcgcgggc
cggttgaagcccggcacccgcctgcccacgcacaggcgcctggccgagcgccacggcctc
gcgctggtgacagcgtcgcgcgtctacgccgaactcgaagccatgggcctggtcagcggc
gaggtcggccgcggcaccttcgtgcgcgaagcgaccattccccgcgacaagggcatcgac
cagcaggccgtggcggcgggccaggtcgacctgaacttcaactacccctcgctgcccggg
caggccgaactgctgcgcggcgcgctgcggcagctggccgccggcggcgagctcgacgcg
atgctgcgctacgcgccgcacggcggccgcatgcacgagcgcgcctgtgtcgcgcggcat
ctcgcgtcacgcgggctcgacgcgctcgacccgtcgcgcgtgctgctggtcgacggcgcg
cagcacggcctcgcggtcacggccatggcgctgctgcagcccggcgacgtggtggcggtc
gatgccctcacctatcccggcttcaaggtgctggccgaggcgcaccggctggagctggcc
cccatcccggcatcgggcgcaggccccgacctcgacgcgctggagcgcctgtgcgcgcgc
cgccgcgtgcgtgccatctatgcgatgccgacgctgcacaacccgctgggctgggtgatg
agcacgagccgccggcgccggctggcaagcatcgcccgcaggcacggcctgctcgtcatc
gaggacgcggcctacgccttcctggccgacgatccgcaagacatgccgccgccaccgctg
gccacgttgctgcccgaatcgaccgtgtacgtctcgggcctgtcgaagaacgtggcgacc
gggctgcgcgtgggcttcgtcgtggcgccgcaggcctgggtgccgaagatcgaacgcgcc
atccgggccacgacctggtgcacgcccggcgtgacaacggccattgcctgcgcatggctg
gaagacggcaccgtcgagcggctcgaatccgaaaagcggcacgacgccgcggtgcgccag
gccatcgtcgacgaaacgctcgcgggcatgcgcttcgtgcgccatccgtcgtcgtacttc
gtgtggctgcccttgcccgaggaaacgcgcgccgaccacgtttcggcggcgctgatgcgc
gaaggcatctcggtatcgacggccgagcccttcgccacgtcgaagcacgtgccgcatgcg
ctgcggctggcgctgggctccgtcgggctgccgagcttgcgcagtgcgctgctgaccgtg
cggcgggtgattggcgagtag
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