Variovorax sp. PMC12: C4F17_24900
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Entry
C4F17_24900 CDS
T05380
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01989
putative tryptophan/tyrosine transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_24900
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Putative tryptophan/tyrosine transporter
C4F17_24900
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_sub_bind
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AVQ83924
LinkDB
All DBs
Position
1:complement(5312007..5312933)
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AA seq
308 aa
AA seq
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MLAAAPSFAADTKSVAVTAIVEHPALDAVRDGVKAELKASGYEEGKNLKFTYQSAQGNVG
TAAQIARKYVGDAPDVIVAIATPSAQAVVASTKTIPVVYSAITDPVAAKLVKNWEASGTN
VTGVSDLSPLEKHVGLIKQVVPNAKRIGVIYSPGEANSVAIVESLKKAASAAGMTVVEAA
AARTVDVPTAAQSLVGKADVIYTPTDNNVVSAFEGIVKVAQQAKLPVVAADTATVERGAV
AALGLNYSDIGRQTGKIVVRILKGEKPGTIASQTSTNFELVVNPGAAKLQGVTLSDELLK
TAKVVSTK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgccgcgccttcgttcgcggccgacaccaagtcggtggccgtgacggccatc
gtggagcatccggcgctggacgccgtgcgcgacggcgtgaaggcagagctcaaggcttcg
ggctacgaagagggcaagaacctcaagttcacctatcaaagcgcgcaaggcaacgtgggc
accgccgcccagatcgcccgcaagtacgtgggcgacgcgcccgacgtgatcgtcgccatc
gccaccccgtcggcgcaggccgtggtcgcttcgaccaagaccattccggtcgtgtactcg
gccatcaccgacccggtggcggccaagctggtgaagaactgggaggccagcggcaccaac
gtgacgggcgtgtccgacctgtcgccgctggaaaagcatgttggcctcatcaagcaggtg
gtgccgaacgccaagcgcatcggcgtgatctacagccccggtgaagccaactcggtggcc
atcgtcgaatcgctcaagaaggccgcctcggccgccggcatgacggtggtcgaggccgcc
gccgcccgcacggtggacgtgccgaccgccgcccagagcctggtcggcaaggccgacgtc
atctacacgccgaccgacaacaacgtggtctcggccttcgaaggcatcgtgaaggtggcc
cagcaggccaagctgccggtggttgcggccgacacggccaccgtggagcgcggcgccgtg
gccgcactgggcctgaactacagcgacatcggccgccagaccggcaagatcgtggtgcgc
atcctcaagggcgagaagcccggcaccatcgcctcgcagaccagcaccaacttcgagctg
gtggtgaaccccggcgcggccaagctgcagggcgtgacgctgtccgacgagctgctgaag
acggcgaaggtcgtgagcaccaagtaa
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