KEGG   Variovorax sp. PMC12: C4F17_24940
Entry
C4F17_24940       CDS       T05380                                 
Name
(GenBank) phosphoglycerate dehydrogenase
  KO
K00058  D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
Organism
vam  Variovorax sp. PMC12
Pathway
vam00260  Glycine, serine and threonine metabolism
vam00270  Cysteine and methionine metabolism
vam00680  Methane metabolism
vam01100  Metabolic pathways
vam01110  Biosynthesis of secondary metabolites
vam01120  Microbial metabolism in diverse environments
vam01200  Carbon metabolism
vam01230  Biosynthesis of amino acids
Module
vam_M00020  Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:vam00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    C4F17_24940
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    C4F17_24940
   00270 Cysteine and methionine metabolism
    C4F17_24940
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vam04147]
    C4F17_24940
Enzymes [BR:vam01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.95  phosphoglycerate dehydrogenase
     C4F17_24940
    1.1.1.399  2-oxoglutarate reductase
     C4F17_24940
Exosome [BR:vam04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   C4F17_24940
SSDB
Motif
Pfam: 2-Hacid_dh_C 2-Hacid_dh ACT_AHAS_ss ACT NAD_binding_2 ACT_4 ERF RS_preATP-grasp-like DUF4041
Other DBs
NCBI-ProteinID: AVQ83931
LinkDB
Position
1:5321333..5322562
AA seq 409 aa
MSKTSLDKSKIKFLLLEGIHPSAIEVIREAGYSQIETLPKALQGEELKAKLADVHFLGIR
SQSQLTADVLSAAPKLVAVGCFCIGTNQVDLDAARERGVAVFNAPYSNTRSVAELVLAEA
ILLLRGIPEKNALAHRGGWLKSAVNSHEIRGKTLGIVGYGSIGTQLSVLAEALGMHVAFY
DVVSKLPLGNARQVPKLHDLLAQSDIVTMHVPELPSTKWMIGEAEIAAMKPGGILINAAR
GTVVEIDALAAAIKARKLWGAAIDVFPVEPGSNKDEFVSPLRGLDNVILTPHIGGSTMEA
QANIGGEVAEKLVKYSDNGTSISSVNFPEVALPAHPGKHRLLHIHRNVPGVLSEINKIFS
DNNINIASQYLQTNEKVGYVVMDIDAASSDLALEKLAKVNGTIRSRVLF
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgagcaaaacctctctcgacaaaagcaagatcaagttccttcttcttgagggcattcat
ccttcggccatcgaggtgatccgcgaggccggctacagtcagatcgagaccctgcccaag
gccctgcagggcgaagagctcaaggccaagctggccgacgtgcacttcctgggcatccgg
tcgcaaagccagctcacggccgacgtgctgtcggccgcgcctaagctggtggcggtgggc
tgcttctgcatcggcaccaaccaggtcgacctggacgccgcccgcgagcgcggcgtggcg
gttttcaacgctccctactccaacacccgctcggtggccgaactggtgctggccgaggcc
atcctgctgctgcgcggcatcccggagaaaaacgccctggcgcaccgcggcggctggctc
aagtcggccgtcaattcgcacgaaatccgcggcaagacgctgggcatcgtgggctacggc
tccatcggcacccagctttccgtgctggccgaagcgctgggcatgcatgtggccttctac
gacgtggtcagcaagctgccgctgggcaatgcccgccaggtgcccaagctgcacgacctg
ctggcccagagcgacatcgtgaccatgcacgtgcccgagctgccgtccaccaagtggatg
atcggcgaggccgaaatcgccgccatgaagccgggcggcatcctgatcaacgccgcgcgc
ggcaccgtcgtcgagatcgacgccctggccgccgccatcaaggccaggaagctctggggc
gccgccatcgacgtgttcccggtcgagccgggcagcaacaaggacgagttcgtgtccccg
ctgcgcggcctggacaacgtgatcctgaccccgcacatcggcggctcgaccatggaggcg
caggccaacatcggcggggaagtggcggagaagctggtcaagtacagcgacaacggcacc
tcgatctcgtcggtcaacttccccgaggtggcgctgcccgcgcaccccggcaagcaccgc
ctgctgcacatccaccggaacgtgccgggcgtgctgtcggagatcaacaagatcttctcg
gacaacaacatcaacatcgcctcgcagtacctgcagaccaacgagaaggtcggctacgtg
gtgatggacatcgacgccgcctcgtccgacctggcgctggagaagctggccaaggtgaac
ggcaccatccgcagccgcgtgctgttctga

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