Variovorax sp. PMC12: C4F17_25185
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Entry
C4F17_25185 CDS
T05380
Name
(GenBank) NAD-dependent isocitrate dehydrogenase
KO
K00030
isocitrate dehydrogenase (NAD+) [EC:
1.1.1.41
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00020
Citrate cycle (TCA cycle)
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
vam01210
2-Oxocarboxylic acid metabolism
vam01230
Biosynthesis of amino acids
Module
vam_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vam_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C4F17_25185
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.41 isocitrate dehydrogenase (NAD+)
C4F17_25185
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Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
AVQ83976
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All DBs
Position
1:5366101..5367132
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AA seq
343 aa
AA seq
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MTTSIPATLIPGDGIGPEIVDATLAALDALGAPFEWDRQIAGLGGVVAAGDPLPLATLDS
IRRTRLALKGPLETPSGGGYRSSNVRLREEFQLYANLRPARTIIPGGRFDKIDLVVVREN
LEGLYIGHEHYVPIDGDPHAVAMATGINTRQGSRRLLEYAFETAVATGRKKVTIVHKANI
MKALTGIFLETGLDLYEKKYKGRFELDTVIIDACAMKLVLNPWQFDMLVTTNLFGDILSD
LVAGLVGGLGMAPGANIGADAAIFEAVHGSAPDIAGKGIANPTALLLAAALMLDHVRLPE
LATRLRTAIDETLNIDKVRTGDLGGTAGTEAFTKALVARINGG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctccattcccgcaaccctgatccccggcgacggcatcggccccgaaatcgtc
gacgccacgctggccgcgctcgatgcgctgggcgcgcccttcgaatgggaccgccagatc
gccggcctgggcggcgtggtggccgccggcgacccgctgccgctggccacgctggacagc
atccgccgcacccgcctcgcgctgaaggggccgctggaaacgccctcgggcggcggctac
cgctcgtcgaacgtgcggctgcgcgaggagttccagctgtacgccaacctgcgccccgcg
cgcaccatcattccgggcggccgcttcgacaagatcgacctggtggtcgtgcgcgagaac
ctcgaaggcctgtacatcggccacgagcactacgtaccgatcgacggcgacccgcacgcc
gtggccatggccaccggcatcaacacccgccagggcagccgccgcctgctggaatacgcc
ttcgagacggccgtggccactggccgcaagaaagtcacgatcgtgcacaaggccaacatc
atgaaggcgctcacgggcatcttcctggagaccggcttggacctgtacgagaagaagtac
aagggcaggttcgagctcgacacggtcatcatcgacgcctgcgccatgaagctggtgctg
aacccctggcagttcgacatgctggtcacgaccaacctgttcggcgacatcctgtccgac
ctggtggcgggcctggtcggcggcctgggcatggcgcccggcgccaacatcggcgccgac
gccgcgatcttcgaggcggtgcacggctccgcgcccgacatcgccggcaagggcatcgcc
aacccgaccgcgctgctgctggccgccgcgctcatgctcgaccacgtcaggctgcccgaa
ctggccacgcgcctgcgcacggccatcgacgagacgctgaacatcgacaaggtgcgcacc
ggcgacctgggcggcacggcgggcaccgaggcgttcacgaaggcgctcgtcgcccgcatc
aacggcggctga
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