Variovorax sp. PMC12: C4F17_25300 Help Entry C4F17_25300       CDS       T05380                                  Name (GenBank) filamentous hemagglutinin   KO K15125   filamentous hemagglutinin Organism vam  Variovorax sp. PMC12 Brite KEGG Orthology (KO) [BR:vam00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:vam00536]     C4F17_25300 Glycosaminoglycan binding proteins [BR:vam00536]  Heparan sulfate / Heparin   Microbial pathogens    C4F17_25300 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPS DUF637 ESPR Fil_haemagg_2 Motif Other DBs NCBI-ProteinID:  AVQ83997 LinkDB All DBs Position 1:5388023..5396332 Genome browser AA seq 2769 aa AA seqDB search MNRHLHRIIFNAARGMRMVVQETATSIGKGASKGTVAAVALFGLLLAGAVRAQIVGAPNV PGHLRPTVLVAPNGVPLVNIQTPSAAGVSRNVYNQFDVMRNGAILNNSRVNVQTQLGGFV QGNPWLARGPARVILNEINGGNPTQLRGHVEVGGQRAEVIIANPAGISVDGGGFINASRA TLTTGVPQFSALGGLDGFLVRDGMVSVEGAGLDAGKTDYAAILARAVQVNAGIWANELQV VAGANQVSADHGSAAPIAGNGPAPAFALDVAALGGMYARKITLIGTETGLGVRNAGNVGA GAGGLVVTAQGRLENTGTLEGARVQLTSGADIDNRGGTVRQTSMAGLTIDSPVLSNTNGG VIGAEPFAPAAGEGGASSALAGAPGAITAAGTVRNDGGRIYAGGPIALKTPQIDNTGGTL SVATMAVTGARFSNAGGTLDVSQSFSANVGQFDNTGGKLNAGSLQISTSGDLINVGGTLT SAGDASLAAGGRADNTRGIITAVGRLTANVAKAVDNSAGKLVANEGLSLDAGALRNSGAI RAGNDVRLAVAGALVNDGGITAGGNTAITAGSLASSGGSVLGAGVQGDGKPGLAGELSVA VSGSLVANGVNLAVGDATLRGASVDLSGSQTGAANISVTATQGNVKTSDKAKVVTPGALR ITANAQADQALLNDAGVLNAGRLNLRASNIANTRGGEIVQTGAEATTLAVSGILNNDGGR IASNGRDLTLSAARLGNAGGVVEHAGEHARTGTLRIAGGSFSGASGRIAGNGALAIDLKN GFEQDNGRTEARQISIEAGSLSNRAGKILGRSLSVDTRGGDLDNGAKGTIAASGALVLRS GALNNDSGLIQSGESLRIDTNGRVLVNTNASGYRTPPADLAGGITSGGTLILKTGEVKNT AGSIDSKGALIAETQAFTNAGGKTLAVGSLDLDAGNGAIDNTGGLIRANGAARLRAGSVV NANTSGDEQGIEARNVTVLGGAELNNISGRIAAVEALDVKDRNAGNSAARGLAITNTDGV LKAGIPAAPGADGKMRSGVGGVFIDAKSFSGDGRITSANDLNVALVQDVTNNTKMDVDGN LNFSTAGKFTNNTKLSAGRKLTVDASVIENAADAEMSGRDTAVKAATTLTNRGLIDSQGA TQIDAGTLHNIGTGRIYGNAVSAAVGTLDNSAETVNGITKAATIAARESLNIGADIVRNR EHALIFSAGTGAKALNIGGGLDGNREAATSGSALENLSARIESLGDMSVSMGRIDNLDTR IKLGPKTTTKVFSRTIGVEGIGHFKPEDVVYTAGEADLLLRNPDGSWRPANGHVWGVWDK TVLTTTDTAIDADPAAIVAGRDMTLTGNGLNRDSRITAGAVLDAPGIRNEALQGELTKQT SFIVNWRATRQAPDVIEPLSRVSRDVGAYEKTGNFNATKGYDAGKGSGGASGPSPVATIV EVPANVGGVVNAGGRSVDAAITQASNAKVGVGQTVPMVVRTSSPRIDIPQASLFNLNGGP RGYLVEADPRFAGYRNWLSSDYLLNNLGQDPGNTLKRLGDGFYEQKLIREQVAQLTGYRY LGGHYNDEEQYTALMNNGATFARQHGLRPGIGLSEVQMAQLTSDIVWLVEKTVTLPEGVT RQVLAPQLYVRVRPGDIDGSGALLSADATVIKGDGDLVNTGTIAGRTLVRIDKDNVENPG GRISGGSVGLNARTDLNNVGGTIDARDSLKIEAGRDINIRSTARADGINRYADRIAGLYV KNPGGALVASAGRDVNLIGGMISNQGAGGYTSITAKQDINLGTVTERRVMTGSSARTSMA MAGSAEIGSTISTNGTTVLKAGRDINARQAVVDAGQGLLSVHADRDINIEAGEARIAGSY SARWTEKKVFGRTTNNLFSSFDAMTSVESKFSGGLVSVGAKNDINIVGSSISGKDGVAVV AKGNLTIVEGRNTSSASFQLNQQKRGISALGASMGLVMPSGRATATGSKVTSDTAASSSI ASSNGGILLQGDNGVFLQGVRVDAAKDVAIKGGNVVIQAATNLYTTIGTTANKSAWYDFG SAAILKDVGKGIKAQETTSTEVDVSTLTRTTLNGANVNITAADTLAIAGTTINTPGKVSL SADTLLLGTQTTEATTRTTSQGRDLVYQVNRDNGSTNQTTNYNQINAGSLSVAANHIQVG LGARDSIEELSKQPGMGWVDQLANDPKLSGKVDWQKVDEVHKNWNYDKQGLTPEGAAVVT LVVAYFTAGAASGVGGAVASGVGATGTTATVVSGAVTAGLTALASQTAVAVVNNQGDIGK ALNDLGSSANVKSLLTAIITGGVLGGLDLNPTGSPTAGAGSREFFTQLGQNLKAGAARAL IGTAINGGSLEDSLKNGLKTAILDTVAAQGAIEIGKEFPVGGFSNYVAHAIAGCAVGAAR ASNGCSSGALGAVVGEASAIAYNDGRNVLTEGLRAETVAFASMFGGLAAAIADGNASQID IGSQAAGNAAANNFAQAVARGATVCLEFALCRNTTLLAGAALAIDAKVQSIRAEHPDWSD RTVNASAIADVMSRGMVEGVRSTYDRFSGTQRPATSDTGNTNPPPNYGPSHTGNTTTPPR VDPTTGGSQIAQPNQDRSSSGGGYGAGGVPRYEGLLTTPHNRPTGPNLVMSQSNSGQPVF DNQLPERLRSEIAIANAAGVKPISPNDPSFGSTVNQGRIKFVITVDGNISLAPHTKNGVE ISHAVLSGGKSVISAGEADISEFSGSYFGLEVRPHSGHFLNGATKDQTEASDRAARAAFE RIGIKFPPN NT seq 8310 nt NT seq  +upstreamnt  +downstreamnt atgaacaggcatcttcaccggatcatcttcaacgccgcgcgcggcatgcgcatggtggtt caggaaacggccaccagcatcggcaagggtgcctccaaaggcaccgtggctgcagtcgcg ctcttcggcctgttgctcgcaggcgccgttcgggcgcagatcgtcggggcgcccaacgtc cccgggcatcttcggccgaccgtgctcgtcgcgcccaacggcgtgccgctggtcaacatc cagacgccctcggccgcgggcgtgagccgcaacgtctacaaccagttcgacgtgatgcgc aacggcgccatcctgaacaacagccgggtgaacgtgcagacgcagctcggtggcttcgtc caaggcaacccgtggctcgcgagaggtccggcgcgcgtcatcctcaacgagatcaatggc ggcaacccgacgcagttgcgtggccacgtcgaggtgggcgggcagcgcgcggaggtgatc atcgccaatccggcgggcatctccgtggatggcggcggcttcatcaacgcatcgcgcgcg accctgaccaccggcgtgccgcagttcagtgcgctgggcgggctcgacgggtttctcgtg cgcgatggcatggtgagcgtcgaaggcgccgggctcgacgccggcaagacggactacgcg gcgatccttgcgcgggccgtgcaggtcaatgcgggcatctgggcgaacgagctccaggtg gtcgctggcgccaaccaggtcagcgccgatcacggcagcgctgcgcccatcgcgggcaac gggcctgcgcctgcctttgcgctcgacgttgccgcgctgggcggtatgtatgcccggaag atcacgctcatcggcaccgagacgggacttggtgtgcgcaacgcgggcaacgtcggcgcg ggtgcgggcggccttgtcgtgacggcgcaggggcgactggaaaacaccgggacgctcgaa ggcgcgcgggttcaactcaccagcggcgcggacatcgacaaccgcggcggcaccgtccgg cagacgagcatggccggcctcacgattgattcgccggtgctcagcaatacgaatgggggc gtgatcggcgcggagccttttgcgccggcagcgggtgagggcggcgcgtcctccgccctc gccggggcacctggcgccatcaccgccgcgggcacggtccggaacgacggcggccgcatc tacgccggcggccctatcgcgctcaagacgccgcagatcgacaacacgggaggcactctc agcgtggcgaccatggccgtgaccggtgccaggttcagcaacgcgggtggcacgctcgac gtcagccaaagcttcagcgcgaacgtcggccagttcgacaacacaggcggcaagctcaat gcgggcagcctgcagatctccaccagcggcgacctgatcaatgtgggcggcacgctcacc agcgccggcgatgcgagcctcgccgccggcggccgggccgacaacacgcgcgggatcatc acggcggttggtcgcctgactgccaatgtggcgaaggccgtcgacaacagcgccggtaag ctggttgcaaatgaagggctgtcgctcgacgcaggcgcgctgcgcaacagcggggcgatc cgcgcgggcaacgacgtcagactcgctgtcgccggtgcgcttgtcaatgacggcggcatc accgccggcggcaacaccgcgatcacggctggcagcctggcgtcaagcggcggcagcgtg ctcggtgccggcgttcaaggcgacggcaagccgggccttgcaggtgaactgagcgtcgcg gtctcgggttcgctggttgcaaatggcgtgaacctggctgtaggcgacgcaacgctgcga ggcgcgagcgtcgatctctcgggcagccagaccggcgcggcgaacatttcggtgactgcg acgcagggcaacgtgaaaaccagcgacaaggcgaaggtggtgacgccgggcgccttgcgc atcactgccaacgcacaggcggaccaggccttgctcaacgacgccggcgtactcaatgcc ggccggctgaatctgcgggcatcgaacatcgcgaacacccgcggcggcgagatcgtgcag accggtgccgaggccaccacgctggccgtctccggcatcctgaacaacgatggcgggcgc attgccagcaacggccgcgacctgacgctgagtgctgccaggctgggaaatgccggcggc gtggtcgagcatgcgggtgagcatgcgcgcaccggcaccttgcgcatcgcgggtggcagc ttcagtggagccagcggccgcatcgccggcaacggcgctctcgccatcgacctgaagaac ggcttcgagcaagacaacggccgtactgaagccaggcagatcagcatcgaggccggttca ttgagcaatcgcgccggcaagatcttgggacgctcgctgtcggtcgatacacgcggcggg gacctcgacaacggcgccaagggcaccatcgccgcatcgggagcgctcgtgctgcgatcc ggcgccttgaacaacgactcgggcttgatccagtcgggcgagtcgctgcgcatcgacacc aacggccgggtcctcgtcaacaccaacgcgtccggctatcggactccaccggcggatttg gccggaggcatcacgagcggcggcacgctcatcctgaagacgggcgaagtcaagaacacc gccggttccatcgattcgaagggagcgttgattgccgaaacccaggcgttcaccaacgcc ggcggcaagacgctggccgtgggcagcctggacctcgatgccggcaatggagcgatcgac aacaccggcggattgatccgcgcgaacggagcggcccggctccgtgccggcagcgtcgtc aatgccaacacctcaggcgacgagcaaggcatcgaagcaaggaacgtcacggttcttggc ggggcggaactgaacaacatctcggggcggatcgccgccgtggaggcgcttgacgtcaag gatcggaacgcgggcaactccgcggccaggggcctggccatcaccaacaccgatggcgtg ctcaaggccgggatacctgctgcgcccggtgcggacggcaagatgcgcagtggtgtcggc ggcgtgttcatcgacgcgaagtccttcagcggcgacggccggattacctccgccaacgac ctgaacgttgcgctcgtacaggacgtcacgaacaacacgaagatggacgtcgatggaaac ctgaacttcagcaccgccggcaagttcaccaacaacacgaagttgtcggcagggcgcaag ctcacggtcgatgcaagcgtcatcgaaaacgcggcggacgccgagatgtcgggcagggac accgcagtgaaggcggcgacgacactgaccaatcgaggcttgatagacagccagggcgcg acacaaatcgacgcgggcacgctgcacaacatcggcacgggccgcatctacggcaacgcg gtgtccgctgcggtgggcacgctcgacaactctgctgaaaccgtcaatggcatcaccaag gccgcgaccatcgcggcacgcgagtcgctgaacatcggtgccgacatcgtccgcaaccgc gagcacgcgctgatcttcagcgctggaacaggcgcgaaggcactgaacatcggcggcggg ctcgacggcaaccgcgaagccgcgaccagcggcagtgccctggaaaacctgagcgcgcgt atcgagtcgctgggcgacatgagtgtctcgatggggcgcatcgacaacctggacacgcgc atcaagctcgggccgaagacgacgaccaaggtgttctccagaaccatcggcgtggaaggc atcggccacttcaagccggaggatgttgtctacaccgcgggcgaggccgacctcttgctg cgcaaccccgatggaagctggaggccagccaatggccatgtctggggagtttgggacaaa accgttctcacgacgaccgacactgccatcgacgccgacccggccgccatcgtcgccggc agggacatgaccctcactggcaacgggctgaaccgcgacagccggatcaccgccggcgct gtgctggacgcgcccggcatcaggaacgaggcgctacagggggagctcaccaagcagacc agcttcatcgtgaattggcgcgccacccggcaggcgccggatgtcatcgaacccctgtcg agagtgagcagggatgtgggcgcctacgagaaaacaggcaacttcaacgccaccaaggga tacgacgcgggcaaaggctccggcggtgcgagcggcccgagccctgtggcgacaatcgtc gaggtgccggccaacgtcggtggcgtcgtgaatgccggagggcgctcggtcgatgccgcc atcacccaagcaagcaacgccaaggtgggtgtcggccagaccgtacccatggtggtgcgc accagttcgccccgcatcgatattccccaagccagtcttttcaatctgaatggcgggccg cgcggctatctcgtcgaggccgacccgcgcttcgccggctaccggaactggctcagcagc gactacctgctgaacaacctcggccaagaccccggtaacacgctcaagcgcctgggcgac ggcttctacgagcagaagctcattcgcgagcaggtcgcgcagctcaccggctatcgctac ctgggtggccactacaacgacgaggagcagtacacggcgctgatgaataacggggccacc ttcgcgcggcagcacggcttgcggccgggcatcggcctgtcggaagtccagatggcgcag ctcaccagcgacatcgtctggctggtcgagaagacggtgacgctgcccgagggagtcacc cggcaagtactggcgccgcagctgtacgtgcgcgtgcgacccggagacatcgacggctct ggtgcactgctgagtgccgacgccaccgtcatcaagggcgatggcgatctggtcaacaca ggcaccatcgctgggcgcacgctggtcaggatagacaaggacaatgtcgagaacccgggc ggacgcatcagtggtggcagcgtcggcttgaatgccaggaccgacctcaacaacgtcggt gggaccatcgatgctcgcgatagtttgaagatcgaagctgggcgcgatatcaacatccgc agcacagcccgggccgacggaatcaacagatacgctgaccgcatcgccggcctctatgta aaaaacccgggtggcgcgctggttgccagcgcgggccgcgacgtgaatttgatcggcggg atgatctccaatcagggtgctggcggctacacctccatcacggcgaagcaggacatcaac ctcgggacggtgaccgagaggcgggtgatgaccggctccagtgcgagaacgtcgatggcg atggccggctcagcggagatcggaagcaccatctccacgaacggcacgacggtgctgaag gctgggcgtgacatcaatgcgcgacaggccgttgtggatgcgggccagggcctgctgagc gtgcatgcggatcgtgacatcaacatcgaggcgggcgaggccaggattgccggcagctac tccgcgcgatggaccgaaaagaaagtcttcggtcgcacgaccaacaaccttttcagcagc ttcgatgcgatgacgagcgtggaaagcaagttctctggcggactggtctctgttggcgcg aagaacgatatcaacatcgtcggatccagcatcagcggaaaggacggcgttgccgtggtg gcgaaaggcaatctcacgattgtcgaaggacgaaacacctcgagcgccagtttccagctg aatcaacagaaaagagggatcagcgcactgggtgcctccatgggccttgtgatgccttcc ggaagggcaactgcaacaggcagcaaggttacctccgacaccgcagcgtccagcagcatc gcgagcagcaacgggggcatcctgctgcagggagacaacggtgttttcctgcagggggtg cgggtggatgcggccaaggacgtcgcaatcaaaggcggcaacgtggtcattcaagcggcc accaacctatatacgacgattggaactacagccaacaagagcgcttggtacgactttggc agcgcagcgatcctcaaggatgttggcaaggggatcaaagcccaggagacgacctccact gaggtggacgtctcgacattgacccgtacaaccctcaatggcgcgaacgtcaacatcact gctgccgatacgctggcgatcgcgggaacgacgatcaacacgccgggcaaggtcagcctg agtgcggacacgttgcttctgggtacgcagacgactgaagcgaccacgcgcacgaccagt cagggccgcgatttggtgtaccaagtcaaccgggacaacggcagcaccaaccagacaacg aactacaaccagatcaatgcggggagcctgtccgtcgcggcgaaccatatacaggtcggc ctgggggctcgagacagtattgaagaactgtccaagcagccgggcatgggctgggtggat cagttggccaatgacccgaagctcagcggcaaagtcgattggcagaaggtcgatgaagtc cacaagaactggaactacgacaagcaggggctgactccagagggcgcggcggtggtgacc ctcgtcgttgcgtacttcacggcaggggcggcctcgggggtcgggggggccgttgcatca ggcgtgggcgcaaccggaaccacggcgaccgtggtgagcggcgcggtcacggcgggtttg accgcgttggccagtcagactgcggtggccgtggtcaataaccaaggcgatatcggcaag gccctgaatgaccttggcagcagcgccaacgtgaagagcctgttgacggccattattacg gggggcgtactcggtgggctcgacctcaatccgacggggtcgccgacggcgggtgcaggc agccgagaattctttactcagcttgggcagaacttgaaggctggcgcggcccgtgcgttg attggcaccgcgatcaatgggggcagtctagaggacagcctcaagaacggcctcaagacc gccatccttgatacggtggccgcgcagggcgccatcgagatcgggaaggaattccctgtc ggcggcttcagcaactacgtggcgcatgctattgctggctgtgcagtcggggcggcccgc gccagcaacggctgtagcagtggggcactcggagcggtggtgggcgaagccagcgctatc gcgtacaacgatggccgcaatgtcctgactgaggggttgcgggccgaaacggtggccttc gccagcatgttcggaggcttggctgcggccatcgcggacgggaatgcgagccagattgac atcggcagccaggcggccggcaacgccgcggcgaacaatttcgctcaagccgtggctcga ggagctaccgtctgcttggaattcgcgctctgtcgcaacactacgctcttggccggagcg gctttggccatcgacgccaaggtgcaatcgatacgcgctgaacacccagactggagcgac cgtacggtcaacgcctcggcgatcgctgacgtaatgagtcgggggatggttgaaggtgtc aggagcacgtacgacaggttttctggtacgcaaaggcccgctacctccgatacgggcaac accaacccgccgccgaactatggaccgtcccacacgggcaatacgacgacgccgccacgc gtagacccgaccacgggcggcagtcagattgctcaaccaaaccaggaccgaagtagctcg ggcggtggatacggagcagggggagttcctagatacgagggcctgctgacgacaccacac aataggccaacagggccgaacctagtgatgagtcagtcaaattcgggacagcccgttttt gataatcaacttccggaaaggcttcgaagcgagatcgcaatagcaaacgctgctggcgtg aaaccaatatcgccgaatgatccatcttttggttctactgttaatcaaggaaggataaaa tttgtcattacggtggatggaaatatatctttggcgccgcatacaaaaaatggagtagaa atatcacatgctgtcttgtcaggtggaaagtcagttatttctgcgggcgaagctgatatt tcggaattttcgggctcttactttggattggaggtgcgacctcattccgggcatttttta aatggagcaacaaaagatcaaactgaagcttcggatcgtgcggcccgtgccgcttttgag cggattggaattaaatttcccccaaattga

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