Variovorax sp. PMC12: C4F17_25305
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Entry
C4F17_25305 CDS
T05380
Name
(GenBank) tRNA 2-selenouridine(34) synthase MnmH
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vam03016
]
C4F17_25305
Enzymes [BR:
vam01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
C4F17_25305
Transfer RNA biogenesis [BR:
vam03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
C4F17_25305
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Gene cluster
GFIT
Motif
Pfam:
AAA_SelU
Rhodanese
Barstar
Y_phosphatase2
Motif
Other DBs
NCBI-ProteinID:
AVQ83998
LinkDB
All DBs
Position
1:complement(5399067..5400116)
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AA seq
349 aa
AA seq
DB search
MSHRQPVRVGDRHAFDTLIDARSPAEFALDHIPGAINCPVLDDEERRIVGTVYVQTGAFE
ARRIGGAMVAANIARHLRETLADRPENWKPLVYCWRGGMRSGSMVTWLRLVGWDAQQLAG
GYKSFRRHVISQIDALTPKLDLRVICGATGSAKTRVLHALAARGAQVLDLEDFASHKGSL
LGSLPGVPQPSQKHFETLIAAVLETVDLSRPLYVEGESIRIGRLSLPLSLVARMRAAPCI
EVCATPEARLAYLLRDYAYLGDDRDALADKLGALKELQGKETVARWQHWAHEGDLPHLFA
ELMALHYDPHYEKSQELHFRAWGRRRSVGAVDLSDEGIGAVAAAVLRLG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcgccagcccgtgcgcgtcggcgaccgccacgccttcgacacgctgatcgac
gcccgctcaccggccgagttcgcgctcgaccacattcccggtgccatcaactgcccggtg
ctggacgacgaggagcgccgcatcgtcggcaccgtctacgtgcagaccggcgctttcgag
gcgcggcgcatcggcggtgcgatggtcgccgccaacatcgcgcggcacctgcgcgaaacc
ctggccgaccggcccgagaactggaagccgctggtgtactgctggcgcggcggcatgcgc
agcggctccatggtgacgtggctgcgcttggtcggctgggacgcgcagcaactcgcgggc
ggctacaagagctttcgccggcacgtcatttcgcagatcgacgcactgaccccgaaactc
gacctgcgcgtgatctgcggcgccaccggcagtgcgaagacgcgcgtgctgcatgcgctt
gccgcgcgcggcgcacaagtgctcgatctggaagatttcgccagccacaagggctcgctg
ctcggttcgctgccgggcgtgccgcagccttcgcagaagcacttcgagacgctgatcgca
gcggtactggaaaccgtcgatctgtcgcgcccgctgtatgtcgagggagagagcatccgc
atcggacggctgtcgctgcctttgtcgctggtggcccggatgcgcgcggcgccgtgcatc
gaggtgtgcgctacgccggaagcgcggctggcgtatctgctgcgcgactacgcctacctg
ggcgacgaccgcgacgcactggccgacaagctgggagcgctgaaggaattgcagggcaag
gagacagtggcgcgctggcagcattgggcgcatgaaggcgatctgccgcatctgtttgcg
gagctgatggcgctgcactatgacccgcactatgagaagtcgcaggagctgcactttcgg
gcgtgggggcggcgccggagcgtgggggcggtcgatctgtcggatgaggggattggggct
gtggctgcggcggtgttgaggttggggtga
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