Variovorax sp. PMC12: C4F17_25515
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Entry
C4F17_25515 CDS
T05380
Name
(GenBank) ferredoxin reductase
KO
K00529
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:
1.18.1.3
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00071
Fatty acid degradation
vam00360
Phenylalanine metabolism
vam00362
Benzoate degradation
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
vam01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
C4F17_25515
09105 Amino acid metabolism
00360 Phenylalanine metabolism
C4F17_25515
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C4F17_25515
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.18 Acting on iron-sulfur proteins as donors
1.18.1 With NAD+ or NADP+ as acceptor
1.18.1.3 ferredoxin---NAD+ reductase
C4F17_25515
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Motif
Pfam:
Pyr_redox_2
Reductase_C
Pyr_redox
NAD_binding_7
Lys_Orn_oxgnase
AlaDh_PNT_C
NAD_binding_8
DAO
GIDA
XdhC_C
HI0933_like
2-Hacid_dh_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AVQ84038
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Position
1:5438781..5440010
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AA seq
409 aa
AA seq
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MNSIVIIGGGHAAAQLCAGLAEAGQGARVHLVCEEACEPYHRPPLSKAFLKSAEETTQPH
KAADWYREAGITLHLGDAAVAIDREAHTVTLRSGAVLPWERLVLATGTRARQMPDLKPGL
ENVASLRAADEAHRLRTRLASAEKVTVLGGGFIGLEVAATAKALGKSVQVIESAPRLLGR
AVSPELSAHVLATHRAAGIDIVLGAQTGAFEVEGDRLVSVQVNGVKQPVDLLLLGIGAVP
ETALAQAAGIECADGIVVDAQMQTSAAGVLAVGDCTRFPDRRAGRALRLESVQNANDQAR
TAVATLTGAARDHDAVAWFWSDQGSMRLQMVGLMPAEGTAGLTSVRRPGPGANPNAFSLF
HYVDGHLVCVESVNAPVDHMMSRKLLEAGRSPDPAVIADASIPLKNHLS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaactccatcgtcatcatcggcggcggccacgccgcggcccagctctgtgccggcctt
gccgaagcggggcagggcgcgcgcgtgcacctggtctgcgaagaggcctgcgagccctat
caccgtccgccgctgtccaaggccttcctcaagagcgccgaggaaaccacgcagccgcac
aaggctgccgactggtaccgcgaagcgggcatcacgctgcacctgggcgacgcggccgtg
gccatcgaccgcgaggcacataccgtcacgctgcgttcgggcgccgtgctgccttgggag
cggctggtgctggccaccggcacacgcgcgcgccagatgcccgacctgaagcctggcctg
gagaacgtcgccagcctgcgcgccgcggacgaggcgcatcgcctgcgcacccggctcgca
tcggccgagaaggtcacggtactgggcggcggcttcatcgggctcgaagtggcggcaacg
gccaaggcgctgggcaagtcggtgcaggtgatcgaaagcgcgccgcgcctgctgggccgc
gcggtgtcgcccgagctgtcggcacacgtgctggccacgcatcgcgcggcaggcatcgac
atcgtgctcggtgcgcagacgggcgcgttcgaggtcgaaggcgaccggctggtgtcggtg
caggtcaacggcgttaagcagcccgtcgacctgctgctgctgggcatcggcgccgtgccc
gagaccgcgctcgcgcaggcggccggcatcgagtgcgccgacggcatcgtggtcgacgca
cagatgcagaccagcgccgccggcgtgctggccgtgggtgactgcacgcgcttccccgat
cgccgcgcgggccgcgcattgcggctcgagtcggtgcagaacgcgaacgaccaggcgcgc
acggcggtcgccacgctgaccggcgcggcacgcgaccacgacgcggtggcgtggttctgg
tccgaccagggcagcatgcggctgcagatggtgggcctgatgccggcagagggcacggcg
ggcctgaccagcgtgcgccgtcccggcccgggcgcgaaccccaatgcgttctcgctcttc
cactatgtcgatgggcatctggtgtgcgtcgaatcggtcaacgcaccggtcgaccacatg
atgagccgcaagctgctcgaagcgggccgcagccccgatccggctgtgattgccgatgct
tcgattcccctgaaaaaccacctgtcgtaa
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