Variovorax sp. PMC12: C4F17_25520
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Entry
C4F17_25520 CDS
T05380
Name
(GenBank) bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00230
Purine metabolism
vam00240
Pyrimidine metabolism
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
C4F17_25520
00240 Pyrimidine metabolism
C4F17_25520
Enzymes [BR:
vam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
C4F17_25520
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
C4F17_25520
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
Motif
Other DBs
NCBI-ProteinID:
AVQ84039
LinkDB
All DBs
Position
1:5440141..5442207
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AA seq
688 aa
AA seq
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MSTCAAVIAAVLTACGGGSGGGGTVFPPVASTPATDTTPAPVAKGTRATVALLETTDLHA
NVRSYDYFKLAEDKSYGYERTATLINAARKEFPNTMLFDNGDTIQGTALADYEALVSRVP
CTQPLSIYKAMNATGYDAGTLGNHEFNYGLDFLNQVIGGGLDVEGVDGSKKCAGPAFPMV
LANVQSVKSGKPLLAPYTIVTRQFTAMAPDGKTVTVPVKVGVIGFTTPGILNWDKRFLEG
KVRTEGAVEAATKYIPELRAKGADIVVALQHGGLDASPYSPTMESPGLYLSKVAGIDALM
MGHQHGTFPDRSAKPGYTQAGVDNAAGTVNGVPAVMASSWGKALGLIRLDLVYDGKAWGV
DKTRTFVEARSTQTGKDGAGKAIYADADPSVAPLVETQHQATIAYVKTPIGTTDFQMSTY
FADVGDPGAIQIVNQAQADYVKNYIAANLPQYASLPVLSVSAPFKSGYEGARDYTDVAAG
NVAINNAADLYLYPNTVYAVKVTGAEIKGWLEAAAKRFNRIDPALATDQQLISTFPGYNF
DMFTTPDVQYEIDVTQAVGSRVKNLMYMGAPMDPAKDFVIATNNYRATSGASFIPALDGR
ATIYPSPDANRDVLIDYIKAKKTITRAANGSARSWAFTKVATAGNVVFSSAPNQLGAATA
AGLANISLLAADDGGGKGQSRYKLDLNN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctgtgccgccgtgatcgccgccgtgctgaccgcctgtggcggcggcagcggc
ggtggcggcaccgtgtttcccccggtcgcgtccacgcccgcgaccgacaccacgccggca
cccgttgccaagggcacgcgcgccacggtcgccttgctggagaccaccgacctgcacgcc
aacgtgcgcagctacgactacttcaagctcgccgaagacaagtcgtacggctacgagcgc
accgccacgctgatcaacgcggcgcgcaaggaattcccgaacacgatgctgttcgacaac
ggcgacaccatccagggcacggcgctggccgactacgaagccctggtgagccgcgttccg
tgcacgcagccgctgtcgatctacaaggccatgaacgccaccggctacgacgccggcacg
ctgggcaaccacgagttcaactacggcctcgatttcctcaaccaggtgatcggcggcggc
ctcgacgtcgaaggcgtggacggcagcaagaagtgcgcaggcccggctttccccatggtg
ctggccaacgtgcagagcgtgaagagcggcaagccgctgctcgcgccgtacaccatcgtg
accaggcagttcaccgccatggcgcccgacggcaagaccgtgaccgtgccggtgaaggtc
ggcgtgatcggcttcaccacgcccggcatcctgaactgggacaagcgcttcctcgaaggc
aaggtgcgcaccgaaggcgccgtcgaagccgccaccaaatacatccccgaactgcgcgcc
aagggcgccgacatcgtggtcgcgctgcagcacggcggcctcgatgcatcgccgtactcg
ccgacgatggaaagccccggcctctacctgtcgaaggtggcgggcatcgacgctctgatg
atgggccaccagcatggcacgttccccgatcgcagcgcgaagccgggctacacgcaggcc
ggcgtggacaacgccgcaggcaccgtcaacggcgtgccggccgtgatggccagctcgtgg
ggcaaggcgctgggcctgatcaggctcgacctggtgtacgacggcaaggcatggggcgtg
gacaagaccaggaccttcgtcgaggcgcgctccacgcagaccggcaaggacggcgcgggc
aaggcgatctacgccgatgccgacccgagcgtcgcgccgctggtcgaaacgcagcaccag
gccaccatcgcctacgtgaagacgcccatcggcaccaccgacttccagatgagcacctac
ttcgcggacgtgggcgaccccggcgcgatccagatcgtgaaccaggcgcaggccgactac
gtgaagaactacatcgcggccaacctgccgcagtacgcgagcctgccggtgctgtcggtg
agcgcgcccttcaagtcgggctatgaaggcgcccgcgactacacggacgtggccgccggc
aacgtggcgatcaacaacgcggccgacctgtacctctaccccaacacggtgtatgcggtg
aaggtgacgggcgccgagatcaagggctggctcgaagccgccgccaagcgcttcaaccgg
atcgatccggcactggcgacggaccagcagctgatcagcaccttcccgggctacaacttc
gacatgttcaccacgccggatgtgcagtacgagatcgacgtgacccaggcggtgggcagc
cgggtcaagaacctgatgtacatgggcgcgccgatggacccggcgaaggacttcgtcatc
gcgacgaacaactaccgtgcgaccagcggcgcgagcttcatccccgcgctggacggccgc
gcgacgatctacccgtcgcccgacgcgaaccgcgacgtgctgatcgactacatcaaggcc
aagaagaccatcacgcgcgcagccaacggttcagcgcgcagctgggccttcaccaaggtc
gcgacggcgggcaacgtggtcttctcttcggcgccgaatcaactgggcgcggccacggcc
gcgggactggccaacatttcgctgctggccgcggacgacggcggcggcaagggtcaatcg
cgctacaagctcgacctgaacaactga
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