Variovorax sp. PMC12: C4F17_25545
Help
Entry
C4F17_25545 CDS
T05380
Name
(GenBank) threonine/serine dehydratase
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00260
Glycine, serine and threonine metabolism
vam00290
Valine, leucine and isoleucine biosynthesis
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01200
Carbon metabolism
vam01230
Biosynthesis of amino acids
Module
vam_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C4F17_25545
00290 Valine, leucine and isoleucine biosynthesis
C4F17_25545
Enzymes [BR:
vam01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
C4F17_25545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
DUF2582
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AVQ84044
LinkDB
All DBs
Position
1:5445082..5446047
Genome browser
AA seq
321 aa
AA seq
DB search
MNDKNTNRWRSEIESAAARLDARAGHFLRQTPLWKLPAAAFGVTAPGAEVWLKLEHMQVS
GSFKARGMMNRLLANDIPESGVVVASGGNAGIATAAAAQALGVPCQVFLPGVSPEAKRAR
LRALGAEVVVVGQLYPDALAACLTRQKESGALLTHAYDQPEVVAGAGTLGREIEAQGGLP
DAVLVSVGGGGLIGGLAGWFEKRARVVALEPEKAPTLLRAREAGEPVDVEVGGIAADSLG
ARRIGAIAWEITQQQVAQALLLSDESIRAAQQWLWKELKLAVEPAAALPLAALQTGAYVP
REGEKVCLIVCGANVDPATVA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgacaagaacacgaaccgctggcgctccgaaatcgagagcgccgccgccaggctg
gacgcgcgcgccggtcatttcctgcgccagacgccgctgtggaagctaccggcggccgcc
ttcggcgtcacggcgccgggcgccgaggtctggctcaagctcgagcacatgcaggtcagc
ggcagcttcaaggcacgcggcatgatgaaccggctgctggccaacgacattcccgaaagc
ggcgtggtcgtggcttcgggcggcaatgccggcatcgccaccgccgccgcggcgcaggcg
ctgggcgtgccttgccaggttttcctgccgggtgtctcgccggaagccaagcgtgcgcgc
ctgcgcgcgctgggcgccgaagtggtcgtcgtcggccagctctatcccgatgcgctggcg
gcctgcctcacgcgccagaaggagtccggcgccttgctcacgcacgcctacgaccagccc
gaagtggtggccggcgcaggcacgctgggccgtgaaatcgaagcgcagggcggcctgccc
gacgcggtgctcgtgagcgtcggcgggggcggcctgatcggcggcctcgccggctggttc
gagaagcgcgcccgcgtggtggcgctggagcccgagaaggcgccgaccctgttgcgcgcc
cgcgaagccggcgagccggtcgacgtcgaagtgggcggcatcgcggccgactcgctcggc
gcgcgccgcatcggcgccatcgcctgggaaatcacgcagcagcaggtcgcgcaggcgctg
ctgctgtccgacgaatccatccgcgccgcgcagcagtggctgtggaaggagctcaagctc
gccgtggagccggccgccgcgctgccgctggccgcgctgcaaacgggcgcctatgtgccg
cgcgaaggcgagaaggtgtgcctgatcgtctgcggcgccaacgtcgaccccgccaccgtc
gcctga
DBGET
integrated database retrieval system