Variovorax sp. PMC12: C4F17_26305
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Entry
C4F17_26305 CDS
T05380
Symbol
deoC
Name
(GenBank) deoxyribose-phosphate aldolase
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00030
Pentose phosphate pathway
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
C4F17_26305 (deoC)
Enzymes [BR:
vam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
C4F17_26305 (deoC)
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GFIT
Motif
Pfam:
DeoC
Motif
Other DBs
NCBI-ProteinID:
AVQ84182
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All DBs
Position
1:5615257..5616324
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AA seq
355 aa
AA seq
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MTSTSLVRPSGAVRSRPAPPASANADAPALPAAPAQAHAAAARNTAQPFDAGWIEGIRFN
LSAAERRVATLPGRRSVKKDAQAGWLLKAITCIDLTTLSGDDTAERVKRLCAKAAMPVRP
DLLAALGFADRKLHTGAVCVYHRFVSTAVEALAGTGIPVAAVSTGFPAGLIPHELKLKEI
EASVRDGASEIDIVITREHVLTGQWKKLYDEMLDFRRAAGAAHVKAILATGELKTLRNVA
KASMVCMMAGADFIKTSTGKEGVNATPLVTLAMLRMIRQYEARTGLRVGYKPAGGVSTAK
TALDYQVLMKEELGRDWLEPDLFRIGASTLLADIERQLEHHITGRYSAYNRHPIG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacctccacttccctcgttcgccccagcggcgcggtgcgctcgcgcccggcgccgccg
gcttccgccaatgcggatgccccggccttgccggcggcgcccgcgcaggcgcatgccgcc
gctgcccgcaacaccgcccagccgttcgacgcgggctggatcgaaggcatccgcttcaac
ctctcggctgcggagcgccgcgtggccacgctgcccggacgccgctcggtcaagaaggac
gcgcaggccggctggctgctcaaggcgatcacctgcatcgacctgaccacgctcagcggc
gacgataccgccgagcgcgtgaagcggctctgcgccaaggccgcgatgccggtgcgcccg
gacctgctggccgccctcggcttcgccgaccgcaagctgcacaccggggctgtgtgcgtg
taccaccgcttcgtctcgaccgcggtcgaggcgctggcgggcacgggcattccggtggcg
gcggtgtccacgggctttccggcgggcctgattccgcacgagctcaagctcaaggaaatc
gaggcctcggtgcgcgacggcgcctcggagatcgacatcgtcatcacccgcgagcacgtg
ctcaccggccagtggaagaagctctacgacgagatgctcgatttccgccgcgcggcgggc
gcggcgcacgtgaaggcgatcctcgcgacgggcgagctcaagacgctgcgcaacgtcgcc
aaggcctcgatggtctgcatgatggccggcgccgacttcatcaagacctccaccggcaag
gagggcgtcaacgccacgccgctggtcacgctcgcgatgctgcggatgatccgccaatac
gaggcccgcaccggcctgcgcgtgggctacaagccggcgggcggcgtctccaccgccaag
accgcgctcgactaccaggtgctcatgaaggaagagctgggccgcgactggctcgagccc
gatctgttccgcatcggcgcttccacgctgctggccgacatcgagcgccagctggagcac
cacatcaccggccgctactcggcctacaaccgccacccgatcggatga
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