Variovorax sp. PMC12: C4F17_26330
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Entry
C4F17_26330 CDS
T05380
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein
KO
K02058
simple sugar transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_26330
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative simple sugar transporter
C4F17_26330
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AVQ84187
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All DBs
Position
1:5621402..5622406
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AA seq
334 aa
AA seq
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MLKKTKIACTVLALGTVAFASALHAQGKPQDIVTVVKITGISWFNRMEVGVKEFGASTPG
VATRQIGPAQSDAAQQQRLVEDLVAKKVDAIAVVSMDPPTLEPVLKRAMERGIKVVTHEA
DNQKNTMVDIEAFDNTAYGARINERLAACMGQQGKWTSLVGSLGSQSQVQWADGGAANAK
KYPKMQLVDAKNESLNDAEKAYGKAKEMLRKHPDLKGFQGSSSLDVLGIGRAVEEAGLQG
KVCVFGTGLPSEAAKFLESGAVGGIAFWDPKDAGIVMNKAAKMLLDGKTITEGTDMGVPG
YNKVSVKKGPGVGIVVTGQAWVEVDKQNYKKYAF
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaaaaccaagatcgcctgcaccgtgctggcactgggcaccgtggccttcgcg
tcggcgctgcatgcgcagggcaagccgcaggacatcgtcaccgtggtgaagatcaccggc
atcagctggttcaaccgcatggaagtgggcgtgaaggagttcggcgcgagcacgccgggc
gtcgccacgcgccagatcggcccggcccagtctgacgccgcgcagcagcagcgcctggtg
gaagacctggtggccaagaaggtcgacgcgatcgcggtcgtgtcgatggacccgcccacg
ctggagccggtgctcaagcgcgcgatggagcgcggcatcaaggtcgtcacgcacgaggcg
gacaaccagaagaacaccatggtcgacatcgaggccttcgacaacacggcctacggcgcg
cgcatcaacgagcgcctggccgcgtgcatgggccagcagggcaagtggacctcgctggtc
ggctcgctgggcagccagtcgcaggtgcaatgggccgacggcggcgcggcgaacgcgaag
aagtaccccaagatgcagctggtcgacgccaagaacgagtcgctcaacgacgccgagaag
gcctacggcaaggccaaggaaatgctgcgcaagcatccggacctgaagggcttccagggg
tcgtcttcgctggacgtgctgggcatcggccgggcggtggaagaggccggcctgcaaggc
aaggtctgcgtcttcggcaccgggctgccgagcgaggcggccaagttcctggagtcgggc
gcggtcggcggcatcgccttctgggacccgaaggacgccggcatcgtcatgaacaaggcg
gccaagatgctgctcgacggcaagaccatcaccgagggcaccgacatgggcgtgccgggc
tacaacaaggtctcggtgaagaaggggccgggcgtcggcatcgtcgtcacgggccaggcc
tgggtcgaagtcgacaagcagaactacaagaaatacgccttctga
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