Variovorax sp. PMC12: C4F17_26435
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Entry
C4F17_26435 CDS
T05380
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02071
D-methionine transport system ATP-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_26435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_26435
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
D-Methionine transporter
C4F17_26435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
RsgA_GTPase
TniB
nSTAND_NTPase5
AAA_15
AAA_16
AAA_23
AAA_30
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AVQ84205
LinkDB
All DBs
Position
1:5649768..5650652
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AA seq
294 aa
AA seq
DB search
MSHPSPDAGRASAAPVIRLQSVQKSFALPSGEVFDAVHSLSLEIQQGDVFGLIGKSGAGK
STLLRLINLLERPDAGQVFVGGRDLTTLSRSELRDTRQNIGMIFQQFNLLQNATVFDNVA
FPLKIHGRHSRAEIDARVRECLALVGLAEKIDTYPAQLSGGQKQRVAIARALAPRPQVLL
CDEPTSALDSETTRSLLETLRDINQKIGVTIVIVTHELSVVEVLCRNVAILEKGRLIEQF
AVEEAPNEERKTALGREIDDLVRRRERDVREQQQAQQQQDRAATAVAAKEPACV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagccatccttcgcccgatgcgggccgcgccagcgcggcacccgtcatccgactccaa
tccgtgcagaagtcctttgcactgcccagcggcgaggtgttcgacgccgtgcattcgctg
tcgctcgaaatccagcagggcgacgtgttcggcctgatcggcaagagcggcgccggcaag
tcgacgctgctgcgcctgatcaacctgctggagcggcccgacgcgggccaggtcttcgtg
ggcggccgcgacctcaccacgctctcgcgcagcgagctgcgcgacacgcgccagaacatc
ggcatgatcttccagcagttcaacctgctgcagaacgccacggtgttcgacaacgtggcc
ttcccgctgaagatccacggccgccactccagggccgaaatcgacgcgcgcgtgcgcgag
tgcctggccctggtgggcctggccgagaagatcgacacctacccggcgcaactgtccggc
ggccagaagcagcgcgtggccatcgcccgcgcgctggcgccgcgcccgcaggtgctgctg
tgcgacgagcccacctcggccctcgactccgagaccacgcgctcgctgctggagacgctg
cgcgacattaaccagaagatcggcgtgaccatcgtgatcgtgacgcacgagctgtcggtg
gtcgaggtgctgtgccgcaacgtggccatcctcgaaaagggccgcctgatcgagcagttc
gccgtcgaagaggcgccgaacgaagagcgcaagaccgcgctgggccgcgaaatcgacgac
ctggtgcgccggcgcgaacgcgacgtgcgcgaacagcaacaggcgcagcagcagcaagac
cgcgccgcaacggccgtggccgccaaggagcccgcctgtgtttga
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