Variovorax sp. PMC12: C4F17_26650
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Entry
C4F17_26650 CDS
T05380
Symbol
glnA
Name
(GenBank) type I glutamate--ammonia ligase
KO
K01915
glutamine synthetase [EC:
6.3.1.2
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00220
Arginine biosynthesis
vam00250
Alanine, aspartate and glutamate metabolism
vam00630
Glyoxylate and dicarboxylate metabolism
vam00910
Nitrogen metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01230
Biosynthesis of amino acids
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C4F17_26650 (glnA)
09102 Energy metabolism
00910 Nitrogen metabolism
C4F17_26650 (glnA)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
C4F17_26650 (glnA)
00220 Arginine biosynthesis
C4F17_26650 (glnA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_26650 (glnA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vam04147
]
C4F17_26650 (glnA)
Enzymes [BR:
vam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.2 glutamine synthetase
C4F17_26650 (glnA)
Exosome [BR:
vam04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
C4F17_26650 (glnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gln-synt_C
Gln-synt_N
Motif
Other DBs
NCBI-ProteinID:
AVQ84243
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All DBs
Position
1:5686328..5687743
Genome browser
AA seq
471 aa
AA seq
DB search
MAKTVADVLKLVKENEVKFVDFRFTDTRGKEQHVTVPVSAFDEDKFTSGHAFDGSSIAGW
KGIEASDMQLMPDPNTANIDPFFEETTLILTCDVIDPADGKAYERDPRSLAKRAEAYMKA
SGLGDTAFFGPEPEFFVFDGVRWKNDMSGCFVKIESEEASWNTDKEYEHGNTGHRPAVKG
GYFPVPPVDSFQDMRSEMCLVLESLGIPVEVHHHEVANAGQMELGTKFSTLVQRADWVQL
QKYVIHNVAHAYGKTATFMPKPIVGDNGSGMHVHQSVWKDGKNLFAGDGYAGLSDFALHY
IGGIIKHARALNAITNPGTNSYKRLVPGFEAPVKLAYSAKNRSASIRIPFVANPKGRRVE
ARFPDPLMNPYLGFAALLMAGLDGVENKIHPGEAASKDLYHLPPEEDALIPTVCHSLDQA
LEYLDKDRAFLTKGGVFTDAYIDAYIELKMQEVTRFRMATHPVEFDMYYSL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaccgtcgccgatgtactcaagctcgtcaaggaaaacgaggtcaagttcgtc
gacttccgcttcaccgacacccgcggcaaagagcagcacgtgaccgtgccggtctcggct
ttcgatgaagacaaattcacctcgggccacgcattcgacggctcgtccatcgccggctgg
aagggtatcgaagcctcggacatgcagctcatgcccgaccccaacaccgccaacatcgac
cccttcttcgaagaaacgacgctgatcctgacctgcgacgtgatcgaccccgccgacggc
aaggcctacgagcgcgacccgcgttcgctcgccaagcgcgccgaggcgtacatgaaggcc
tcgggcctgggcgacaccgccttcttcggtccggaacccgaattcttcgtgttcgacggc
gtccgctggaagaacgacatgtcgggctgcttcgtgaagatcgagtccgaagaagcctcg
tggaacaccgacaaggaatacgagcacggcaacaccggccaccgtcccgcggtcaagggc
ggctacttcccggttcccccggtcgacagcttccaggacatgcgctcggaaatgtgcctg
gtgctcgaatcgctcggcatcccggtcgaagtgcatcaccatgaagtggccaacgccggc
cagatggaactcggcaccaagttcagcacactcgtgcagcgcgccgactgggtccagctg
cagaagtacgtgatccacaacgtggcccacgcctacggcaagaccgccaccttcatgccc
aagcccatcgtcggcgacaacggctccggcatgcacgtgcaccagtcggtctggaaggac
ggcaagaacctgttcgcaggcgacggctacgcaggcctgtcggacttcgcgttgcattac
atcggcggcatcatcaagcacgcccgtgccctgaacgccatcacgaaccccggcaccaac
agctacaagcgcctggtccccggcttcgaagccccggtgaagctggcctactcggcaaag
aaccgctcggcctcgatccgcatcccgttcgtggccaacccgaagggccgccgcgtcgaa
gcgcgcttccccgatccgctgatgaacccgtacctgggcttcgccgcgctgctgatggcc
ggcctggacggcgtggaaaacaagatccacccgggcgaagccgccagcaaggacctgtac
cacctgccgccggaagaagacgcgctgatcccgaccgtctgccacagcctcgaccaggcg
ctggaatacctggacaaggaccgtgcgttcctgaccaagggcggcgtgttcaccgacgcg
tacatcgacgcgtacatcgaactgaagatgcaggaagtcacgcgcttccgcatggcgacg
caccccgtcgagttcgacatgtactactcgctctga
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