Variovorax sp. PMC12: C4F17_26665
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Entry
C4F17_26665 CDS
T05380
Symbol
ntrC
Name
(GenBank) nitrogen regulation protein NR(I)
KO
K07712
two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_26665 (ntrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vam02022
]
C4F17_26665 (ntrC)
Two-component system [BR:
vam02022
]
NtrC family
GlnL-GlnG (nitrogen regulation)
C4F17_26665 (ntrC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA_16
AAA_2
AAA
nSTAND3
AAA_19
HTH_30
AAA_22
APS_kinase
HTH_50
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AVQ84246
LinkDB
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Position
1:5689536..5691071
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AA seq
511 aa
AA seq
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MKPIWIVDDDQSIRFVLEKALLREDLPTRSFTNTREVLAALEQAADDEQQGPQVLVSDIR
MPGGSGLDLLDKIKAKHPGLPVIIMTAFSDLDSAVSAFQGGAFEYLPKPFDLPRAVELIR
RAVDESQREEVAEERMVAAPEMLGQAPAMQDVFRAIGRLSQSNVTVLITGESGSGKELVA
RALHKHSPRANGPFVAINTAAIPKDLLESELFGHERGAFTGAQTMRRGRFEQAEGGTLFL
DEIGDMPFDLQTRLLRVLSDGHFYRVGGHNSVKANVRVIAATHQDLEQRVKLGGFREDLF
HRLNVIRLRLPALRERGEDVPALTRHFLQVSARQLGVEPKRISDAALTKLAAFSFPGNVR
QLENICHWLTVMAPAQLIEAKDLPPEVMAVGTAASEAHAAPEAAPQAPAIASPLVAPPAA
FGDAPAVAHVHSEAVESPALVSSWESGLEVEAQALLAAGRTDVWDVLSRRFESRLILTAL
ANTRGRRIEAAQKLGIGRNTITRKIQELGIE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatctggatagttgatgacgaccaatcgattcgcttcgtgctcgagaaggct
ctgctgcgcgaagacctgcccacgcgcagtttcaccaacacgcgcgaggtgctcgccgca
ctcgagcaggccgccgacgacgaacagcagggcccccaggtactggtgagcgacatccgc
atgcccggcggctccgggctcgacctgctcgacaagatcaaggccaagcaccccggcctg
cccgtcatcatcatgacggcgttctccgacctcgacagcgccgtctcggccttccagggc
ggcgcattcgaatacctgcccaagcccttcgacctgccgcgcgcggtcgaactcatccgc
cgtgccgtcgacgaaagccagcgcgaggaagtggccgaggagcgcatggtcgccgcgccc
gaaatgctcggccaggcccctgcgatgcaggacgtgttccgcgccatcggacggctctcc
cagagcaacgtcacggtgctcatcaccggcgaatcgggctcgggcaaggaactggtggcg
cgtgcgctgcacaagcactcgccgcgcgccaacggccccttcgtggccatcaacaccgca
gccattcccaaggacctgctcgagagcgaactgttcggccatgagcgcggcgccttcacc
ggcgcgcagaccatgcgccgcggccgcttcgagcaggccgagggcggcacgctcttcctc
gacgaaatcggcgacatgcccttcgacctgcagacgcgcctgctgcgcgtgctgagcgat
ggccatttctaccgcgtgggcggccacaactcggtgaaggccaacgtgcgcgtcatcgcg
gccacccaccaggacctggagcagcgcgtcaagctcggcggcttccgcgaagacttgttc
caccgcctcaacgtgatccgcctgcgcctgccggcgctgcgcgaacgtggcgaagacgtg
cccgcgctcacgcgccacttcctgcaggtgagcgcgcgacagctcggcgtggagcccaag
cgcatttccgatgccgcgctgaccaagctcgcggcgttcagcttcccgggcaacgtgcgc
cagctcgagaacatctgccactggctgacggtgatggcgccggcccagttgatcgaggcc
aaggacctgccgcccgaagtgatggcggtgggcaccgcggccagcgaggcgcatgctgcg
ccggaagctgccccgcaggccccggccatcgcgagcccgctggttgcgcccccggcggcc
ttcggcgacgcgcccgccgtcgcgcatgttcactccgaggccgtcgaaagccccgcgctg
gtgagcagctgggaaagcggcctcgaggtcgaggcccaggccctgctggccgccggccgt
accgacgtgtgggacgtgctctcgcgccgcttcgagtccaggctcatcctcaccgcgctg
gccaacacgcgcgggcggcgcatcgaggccgcgcagaagctgggtatcgggcgcaacacc
atcacccggaaaatccaggaactcggcatcgaatga
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