Variovorax sp. PMC12: C4F17_27100
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Entry
C4F17_27100 CDS
T05380
Symbol
accC
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00061
Fatty acid biosynthesis
vam00620
Pyruvate metabolism
vam00640
Propanoate metabolism
vam00720
Other carbon fixation pathways
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
vam01212
Fatty acid metabolism
Module
vam_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
C4F17_27100 (accC)
00640 Propanoate metabolism
C4F17_27100 (accC)
09102 Energy metabolism
00720 Other carbon fixation pathways
C4F17_27100 (accC)
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C4F17_27100 (accC)
Enzymes [BR:
vam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
C4F17_27100 (accC)
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
C4F17_27100 (accC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
DUF5930
LAL_C2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AVQ84317
LinkDB
All DBs
Position
1:5767006..5768358
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AA seq
450 aa
AA seq
DB search
MFDTVLIANRGEIALRIQRACRGLGLRTVAVHSEADRDAMYVAQADQALCIGPAAPGLSY
LNQSAILFAAEVSGAQAIHPGYGFLSENAGFADRVAQAGLVFVGPSAACIRTMGDKVSAK
RAMRKAGVPCVPGPDEPLPDDPAAVLALARDIGYPVIVKAAGGGGGRGMRVVHEEAALLD
AMALTREEARQAFGNPEVYIEKFLLHPRHVEIQVLADSHGNAVWLGSRDCSLQRRHQKVI
EEAPAPGIDDALMAEVGERCAAACRQIGYCGVGTFEFLYEKGAFYFIEMNTRLQVEHPVT
EMTTGIDIVQQQLRMALGERLSLTQADVRCQGHAIECRINAENPDTFAPAPGRITGWQVP
GGFGVRVDSHAGAGYRVPPYYDSMIAKLIVHGHTRADALDRMRLALAETRVEGIATNVPL
HRALVQDDGFAAGGVDIHHLERWLKRRSAA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaccgtgctcattgccaaccggggcgagatcgccctgcgcatccagcgtgcc
tgccgcggcctgggcctgcgcacggtggccgtgcattccgaggcggaccgcgacgccatg
tacgtcgcgcaggccgaccaggcgctgtgcatcgggcctgccgcgccgggcctgagctac
ctgaaccagtccgccattttgttcgccgccgaggtgagcggcgcgcaggcgatccatccc
ggctacggctttctctcggagaacgcgggcttcgcggatcgtgtggcgcaggccggcctc
gtgttcgtcgggcccagcgccgcgtgcattcgcaccatgggcgacaaggtctcggccaag
cgcgcgatgcgcaaggccggcgtgccctgcgtgcccggccccgacgagccgctgccggac
gacccggccgccgtgctggccctggcgcgcgacatcggctatccggtgatcgtgaaggcg
gcaggcggtggcggcgggcgcggcatgcgcgtggtgcacgaagaagccgcgctgctcgat
gccatggccctcacgcgcgaggaagcgcgccaggccttcggcaatcccgaggtctacatc
gagaaattcctgctgcatccgcgccatgtcgagatccaggtgctggccgacagccacggc
aacgcggtgtggctgggcagccgcgactgctcgctgcagcggcgccaccagaaggtgatc
gaagaggcgcccgcgcccggcatcgacgacgcgctgatggccgaggtgggcgagcgctgc
gcggccgcgtgccggcagatcggctactgcggcgtgggcaccttcgagttcctgtacgaa
aagggcgccttctatttcatcgagatgaacacacgcctgcaggtggagcacccggtgacc
gagatgaccaccggcatcgacatcgtgcagcagcagttgcgcatggcgctcggcgagcgc
ctgtcgctgacgcaggccgacgtgcgctgccagggccacgccatcgagtgccgcatcaac
gccgagaaccccgacaccttcgcgcccgcgccgggccgcatcaccggctggcaggtgccc
ggcggcttcggtgtgcgcgtcgattcgcacgcgggcgccggctaccgcgtgccgccgtac
tacgactccatgattgccaagctcatcgtgcacggacatacccgcgccgacgcgctcgac
cgcatgcgcctggcgctggccgagacgcgcgtggaaggcatcgccaccaacgtgccgttg
caccgcgcgctcgtgcaggacgacggctttgccgcgggcggcgtggacatccatcacctc
gaacgctggctgaagcgaaggagcgcggcgtga
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