Variovorax sp. PMC12: C4F17_27180
Help
Entry
C4F17_27180 CDS
T05380
Name
(GenBank) DNA-binding response regulator
KO
K02483
two-component system, OmpR family, response regulator
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vam02022
]
C4F17_27180
Two-component system [BR:
vam02022
]
OmpR family
Unclassified
C4F17_27180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
AVQ84331
UniProt:
A0A2P1VGQ8
LinkDB
All DBs
Position
1:5784299..5785081
Genome browser
AA seq
260 aa
AA seq
DB search
MIRYPIRRNVNLSTRILIVDDDAGIRSLVASFLEKHGFQVDGAGHPAEMRERLAQADYAL
IVLDVMMPGEDGLSALRELQRIGGPPVIMLSAVGTDIDRIVGLEIGAEDYLAKPCNPREL
LARIRTVLRRAAKPSAAQAAPAVRQAAGDAPATLLYFAGWRIDLETRLLHDPKDQPVDLS
DGEFRLLRALVEHPRRVLTRDQLVQYALGAESDSYDRAIDVQISRLRRKLASGEARADLI
RTVRNEGYMFVPAVTRTPEA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctacccgatccgccgcaacgtgaacctgtccacccgcatcctcatcgtcgac
gacgacgccggcatccgcagcctggtggcgtccttcctggaaaagcatggcttccaggtc
gacggggccggccatccggcggagatgcgcgaacgccttgcacaggccgactacgcgctc
atcgtgctcgacgtgatgatgcccggcgaagacggcctgagcgcgctgcgcgagctgcag
cgcatcggcgggccgccggtcatcatgctgtcggccgtgggcaccgacattgaccgcatc
gtgggcctggagatcggcgccgaagactacctggccaagccgtgcaacccgcgcgagctg
ctggcgcgcatccgcaccgtgctgcggcgcgcggccaagccttctgccgcccaggccgcg
ccggccgtgcggcaagcggcgggcgatgcgcctgccacgctgctgtacttcgcgggctgg
cgcatcgacctcgaaacccgcctgctgcacgacccgaaggaccagcccgtggacctgtcc
gacggcgagttccgcctgcttcgcgcgctggtggagcatccgcgccgcgtgcttacgcgc
gaccagctggtgcagtacgcgctcggcgcggaaagcgattcgtacgaccgcgcgatcgat
gtgcagatcagccgcctgcgccgcaagctggcctccggcgaagcgcgtgccgacctgatc
cgcacggtgcgcaacgagggctacatgttcgtgcccgcagttacgcgcacgcccgaggcc
tga
DBGET
integrated database retrieval system
