KEGG   Variovorax sp. PMC12: C4F17_27230
Entry
C4F17_27230       CDS       T05380                                 
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
  KO
K11893  type VI secretion system protein ImpJ
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vam02044]
    C4F17_27230 (tssK)
Secretion system [BR:vam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C4F17_27230 (tssK)
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: AVQ84840
LinkDB
Position
1:complement(5797110..5798393)
AA seq 427 aa
MLLSPQHFQQFSARMDSLVAWQTLAAAPFSWGVRRLVFDQGLLPAGMLRVLALEAILPDG
TAVQYSAAEAAHGALELSLAPHQEQLANEPLDIYLTLPVNAPARHRSATVRFRSVAGAPV
EDAVSDAEPANIPRMLPRLALSAGAVPPGTHVHLRLGQVFKDNEVVKLGDAQPPLLEVAR
DNPLWTAAAGLLGQLRGKAAFVAKQTAVPSSRVDDRLAHLELKDRLRSLLSGLPHAEAVL
RTPHLHPLPMYWSLCALLASLSLLRPGGLPPVPMDYDHANPSLVFQPLLLALRDAVSEVS
QEYREHKFEFRHGAFETTLQPQWLSGARIVIGLRGQSDKDLLAWMDSAIVGSQSAYPSLR
ERRVLGAVRRPIESADELGLRPGSGYLLYAIQTSAALTVPGELLVIANANEGATAQPPQE
IVLFIKD
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgctgctgtcgccgcagcacttccagcagttctcggcgcgcatggactccctcgtggcc
tggcagacgctggccgccgctcccttcagctggggcgtgcgccgcctggtcttcgaccag
ggcctgctgccggccggcatgctgcgcgtgctggcgctcgaagccatcctgccggacggc
accgccgtgcagtactcggccgccgaggcggcccacggcgcgctggagctgtcgctagcg
ccgcaccaggaacagctggccaacgagccgctcgacatctacctcacgctgcccgtgaac
gcgccagcacggcaccgctccgcgaccgtgcgctttcgctcggtggccggcgcgccggtg
gaagacgcggtgtctgatgccgagcccgccaacattccgcgcatgctgccgcgcctggcg
ctgagcgcgggcgcggtgccgcccggcacgcacgttcacctgcggctgggccaggtcttc
aaggacaacgaagtggtgaagctcggcgacgcgcagccgccgctgctggaagtggcgcgc
gacaacccgctgtggacggccgccgccggcctgctgggccagttgcgcggcaaggccgcc
ttcgtcgccaagcagacggcggttccgtcttcgcgcgtggacgaccggctcgcgcacctg
gagctgaaagaccggctgcgcagcctgctgtcgggcctgccgcatgccgaggccgtgctg
cgcacgccgcacctgcatccgctgccgatgtactggtcgctgtgcgcgctgctggcctcg
ctgagcctgctgcggcccggcggcctgccgccggtgccgatggactacgaccatgcgaac
ccttcgctcgtgttccagccgctgctgctggcgctgcgcgacgcggtgtccgaagtgagc
caggagtaccgcgagcacaagttcgagttccgccacggcgccttcgagaccacgctgcag
ccacaatggctgtcgggcgcgcgcatcgtgatcggcctgcgcggccagtccgacaaggac
ctgctggcctggatggacagcgccatcgtcgggtcgcagtcggcctacccgtcgctgcgc
gaacgccgcgtgctgggcgcggtgcgccgccccatcgagtcggccgacgaactgggcctg
cgccccggctcgggctacctgctctacgccatccagaccagcgccgcgctcaccgtgcct
ggcgaactgctggtgatagccaacgccaacgaaggcgccaccgcgcagcctccgcaggaa
atcgtgctgttcatcaaggactga

DBGET integrated database retrieval system