Variovorax sp. PMC12: C4F17_27355
Help
Entry
C4F17_27355 CDS
T05380
Name
(GenBank) hypothetical protein
KO
K07058
membrane protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
C4F17_27355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Virul_fac_BrkB
Motif
Other DBs
NCBI-ProteinID:
AVQ84358
UniProt:
A0A2P1VGP5
LinkDB
All DBs
Position
1:5822279..5823490
Genome browser
AA seq
403 aa
AA seq
DB search
MISAMNRRQLWRDLSRFPWRNTAAVLGERFREDKLGLTASSLTFTTTIAMVPFFTVALAL
FTVFPMFAKMQGRLQRWLIESLIPDNIARQVLGYLNQFASKASGLGIAGLIVLLITAIAL
ILTIDKTLNNIWRVRSPRPLAQRVLIYWATITLGPLILAVSLSTTSYVFSASRDVVGGTM
VKLAFDSLEFMLLAAGMASLYHYVPNTNVRWSHAWAGGIFVAAAIEIAKRVLGYYLSLVP
TYSVLYGAFATFPILLVWIYVAWVIVLLGAVIAAYLPSLLTGVARRGGTAGWPLQLAMES
LQHLARARATPAKGMGAAELVTRMRVDSLQLAPVLETLVALDWIAPLAEEPANEDPRYVL
LADPSTPIEPLLKELLMPRAEPLEDLWQKGPLRSLRLGDVLLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatatccgccatgaatcgtcggcagctttggagggatctttcgcgttttccgtggcgc
aacaccgcggcggtactgggcgagcgtttccgcgaagacaagctcggcctcacggccagc
agcctgaccttcaccaccaccatcgcgatggtgccgttcttcacggtggcgctggcgctg
ttcaccgtgttccccatgttcgccaagatgcagggccgcctgcagcgctggctgatcgag
agcctgatcccggacaacatcgcgcggcaggtgctcggctacctgaaccagttcgcgagc
aaggccagcgggctgggcatcgcgggcctgatcgtgctgctgatcaccgccattgcgctg
atcctcaccatcgacaagacgctcaacaacatctggcgcgtgcgctcgccgcggccactg
gcgcagcgggtgctcatctactgggccaccatcacgctggggccgctgatcctggcggtg
agcctgtcaaccacgtcctatgtgttctcggcctcgcgcgacgtggtgggcggcaccatg
gtcaagctggccttcgacagcctcgagttcatgctgctcgcggccggcatggcctcgctc
taccactacgtgcccaacaccaacgtgcgctggtcgcatgcgtgggccggcggcatcttc
gtggcggcggccatcgagatcgccaagcgcgtgctgggctactacctgagcctggtgccg
acctattcggtgctgtacggcgccttcgccaccttcccgatcctgctggtgtggatctac
gtggcctgggtgatcgtgctgctcggcgcggtcatagcagcctatctgccgagcctgctg
acgggcgttgcgcggcgcggcggcaccgccggctggccgctgcagctggccatggaatcg
ctgcagcacctggcccgcgcgcgcgccacgccggccaagggcatgggcgcggccgagctg
gtgacgcgcatgcgggtcgattcgctgcagctcgcgccggtgctcgagacgctggtggcg
ctcgactggatcgcaccgctggcggaagagcccgccaacgaagatccgcgctacgtgctt
ctggccgacccctcgacccccatcgagccgctgctgaaggaactgctgatgccccgggcc
gagccgctcgaagacctctggcagaagggcccgctgcgctccctgaggctgggcgacgtg
cttctgatctag
DBGET
integrated database retrieval system