Variovorax sp. PMC12: C4F17_27520
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Entry
C4F17_27520 CDS
T05380
Name
(GenBank) phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
KO
K00033
6-phosphogluconate dehydrogenase [EC:
1.1.1.44
1.1.1.343
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00030
Pentose phosphate pathway
vam00480
Glutathione metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
Module
vam_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
vam_M00006
Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
C4F17_27520
09106 Metabolism of other amino acids
00480 Glutathione metabolism
C4F17_27520
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.44 phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating)
C4F17_27520
1.1.1.343 phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating)
C4F17_27520
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Motif
Pfam:
6PGD
NAD_binding_2
NAD_binding_11
DUF3071
Phage_tail_X
Motif
Other DBs
NCBI-ProteinID:
AVQ84389
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Position
1:complement(5855573..5856994)
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AA seq
473 aa
AA seq
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MSTKSDFGLIGLAVMGQNLVLNVESRGFQVSVYNRTEATTEAFIAANPGKKLVGTKTLEE
FVQSLAKPRKIQIMVKAGAPVDQVIEQLIPLLDKDDIVIDGGNSLYTDTERRDAYLSSKG
LRFIGAGVSGGEEGARKGPSIMPGGPLSTWEVMKPIFESIAAKVDGDPCVIHIGPGGAGH
YVKMVHNGIEYGDMQLICEAYSLFKAAGFSTDEMAAIFNEWNDGELQSYLIQITAKALEQ
KDPETGKPIVDVILDKAGQKGTGQWTLINAAENAVVISTINAAVEARVLSSQKKARVAAS
KQLQGPKIELSLEKKALVAKVHDALYASKVISYTQGFDLIKTMGDKKEWKLDLGGIASIW
RGGCIIRARFLNRITDAFRTDPALGNLMLDPFFKDLLNRTQQSWREVVALAVSNGIPVPA
FSASLAYYDSYRTERLPANLLQAQRDFFGAHTYERVDKPEGQFFHTDWPEVIG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaaaagcgatttcggactgatcggcctggccgtgatgggccagaacctcgtg
ctgaacgtggaaagccgcggcttccaggtcagcgtgtacaaccgcaccgaagccaccacc
gaagccttcattgccgccaaccccggcaagaagctggtgggcaccaagacgctggaggag
ttcgtccagagcctggccaagccccgcaagatccagatcatggtcaaggccggcgcgccg
gtcgaccaggtgatcgagcagctcatcccgctgctcgacaaggacgacatcgtcatcgac
ggcggcaacagcctctacaccgacaccgagcgccgcgacgcctacctgagcagcaagggc
ctgcgcttcatcggcgccggtgtttcgggcggcgaggaaggcgcgcgcaagggcccgtcg
atcatgccgggcggcccgctttccacctgggaagtgatgaagccgatcttcgagagcatc
gcggccaaggtcgacggcgacccctgcgtcattcacatcggccccggcggcgcgggccac
tacgtgaagatggtgcacaacggcatcgagtacggcgacatgcagctcatctgcgaggcc
tacagcctgttcaaggcggccggcttcagcaccgacgagatggccgccatcttcaacgaa
tggaacgacggcgagctgcagagctacctgatccagatcaccgccaaggcgctcgagcag
aaagacccggaaaccggcaagccgatcgtcgacgtgatcctcgacaaggccggccagaag
ggcacggggcagtggacgctgatcaacgcggccgagaacgcggtggtcatcagcaccatc
aacgccgccgtcgaggcgcgcgtgctgtcgtcgcagaagaaggcgcgcgtggcggccagc
aagcagctgcaggggccgaagatcgagctgtcgctcgagaagaaggcgctggtggccaag
gtgcacgacgcgctctacgcctccaaggtcatcagctacacgcagggcttcgacctcatc
aagacgatgggcgacaagaaggaatggaagctcgacctgggcggcatcgcatcgatctgg
cgcggcggctgcatcatccgggcacgcttcctgaaccgcatcaccgacgccttccgcacc
gacccggcgctgggcaacctgatgctcgacccgttcttcaaggacctgctcaaccgcacg
cagcagagctggcgcgaagtggtggcgctggcggtgagcaacggcattcccgtgccggca
ttcagcgcgtcgctggcctactacgacagctaccgcacagagcgcctgccggccaacctg
ctgcaggcgcagcgcgacttcttcggcgcccatacctacgagcgcgtcgacaagcccgaa
ggccagttcttccacaccgactggcccgaagtcatcggctga
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