Variovorax sp. PMC12: C4F17_27545
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Entry
C4F17_27545 CDS
T05380
Name
(GenBank) transcriptional regulator
KO
K03892
ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_27545
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
C4F17_27545
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_20
MarR_2
HTH_5
TrmB
Penicillinase_R
DUF7347
HTH_24
HTH_IclR
HTH_69
Motif
Other DBs
NCBI-ProteinID:
AVQ84393
LinkDB
All DBs
Position
1:complement(5860563..5860886)
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AA seq
107 aa
AA seq
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MEENDVVRSLAALAQPIRLRVFRALVVAGPAGLTPGALTESLEVPGTSLSFHLKELMNSG
LVSQERQGRNLVYRAAFEQMNALLGYLGENCCQGEACAVEAPSACGC
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaacgatgtcgtccgctccctcgccgccctggcgcaacctattcgcctgcgc
gtgttccgcgcgctggtggtcgccggccctgccggactgacgcccggtgcactcaccgaa
tcgctggaggtgcccggcaccagcctgtcgtttcacctcaaggaactgatgaattctggg
ctggtgtcgcaggaacggcaggggcgcaacctcgtgtaccgcgccgccttcgagcagatg
aacgccctgctcggctacctcggcgagaactgctgccagggcgaggcctgcgccgtcgag
gctccttcggcatgcggctgctga
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