Variovorax sp. PMC12: C4F17_27695
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Entry
C4F17_27695 CDS
T05380
Name
(GenBank) non-ribosomal peptide synthetase
Organism
vam
Variovorax sp. PMC12
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensation
AMP-binding
PP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AVQ84860
LinkDB
All DBs
Position
2:complement(22934..30733)
Genome browser
AA seq
2599 aa
AA seq
DB search
MTHSLIHPTIARTVSEGDAVALSYAQEQLCFLQKLEPGLTAYNLPRVFRLAGLLDAGALE
RAFQALIARHSVLRTRFFEQDGVPMQSVQADAPFAVERIDLSGLDVEAQKAPLDEAVRRT
AGHVFDLGVAPAMVACLVKLGDERHVLAVCLHHIVSDAWSNPILARDLAEAYRLALHSAG
PVRLPPLAVQYADYAVWQRANVEGGALERQLAHWNRHLGPEVPVLDLPTDRARPSRKSFA
GTALGFDVPPALALAVQKFCRAEKCTPFVALFAAWQVLLARSSGQNDFTVGVPNAGRQHE
EVSELLGFFVTTQVFRARLSPRQSLREICRQVRADALAALDNAELPFEVLLASRTDRRDP
ARSPLFQVMFGVQMAGETVAFDLEGVRAEIEEFDDAGAKFDLSLDFYVDARGVRGRLEYN
TDLFEESTARRLVARYLRVLEALATEPDSVLAKLVLTSEGEQAQLMRQSENLPHRACADP
VHRLIGQQARRTPEAVALVFGHVSLSYAQLEARANRLAHRLIALGVRPDTKVGIATERSV
EMVVGLLAILKAGGAYVPIDPEYPQDRIIYMLEDSGVSLLLTQSHIARAIPVREDVQTIE
LDLLDLETGPSVDPDVPLHGEHLAYVIYTSGSTGRPKGASNRHRSLYNRLAWMQDAYSLD
ETDTVLQKTPFSFDVSVWEFFWPLMQGARLVVAQPGDHREPGRLVESIRRHGVTTIHFVP
SMLQAFVAHEGIEACTSLKRIVCSGEALPAEAQARVFERLPGAGLYNLYGPTEAAIDVTH
WTCQADGRNHVAIGRPIAGTKTYVLDAGLNLVPQGVGGELYLGGIGLARGYLDKSALTSE
RFIADPFGDTGERLYRTGDLVRWREDGQLEYLGRIDHQVKIRGFRIELGEIEAQLLVQPE
VREAVVIADDGPGGARLVGYVSLKANQPLEPAALKTRLATVLPDYMIPSALVVLDALPLN
ANGKIDRKALPRPERPLSGLHEVPAEGVEQVLAGIWAAVLRVASVGRHDNFFELGGDSIL
SLQIVSRLRAAGWKLTPRQMFDRQTIAELAEVAEPEDAVTAQAGVGGTVEGMVPLLPFQA
EFFATDIPCRHHWNQALLFQSRERLDPVALEAALQALVRHHDALRLRFVQGADGQWRQAC
SPAETSPAGRLLWVRQARDAGAIEALCEEAQRSLDLARGPMLRALAIEVADGGARLLLAI
HHLVVDAVSWRVLLQDLQRAHAQCLEGRLPSFPAKSSSFQDWALALQARAASLDAELPYW
QALADAPVTLPCDHPHGVNTAATREFVELRLDREHTQALLKDVPAAYRTRINDVLLTALG
RALCDWSGHERVLVDVEGHGREDLFVQLDLSRSVGWFSSLFPVLLDPLGTPGDALRRAKE
QLRRVPGRGIGYGVLKHMGNDGQRRALAALPRAQVVFNYLGQLDGSLDAQGPWHLAGESP
GASTDGAAPLSHSFTVNGQVQDGELRLSVGYSRARYERATVQRWAERFQQELEGLIAHCT
GGARGVTPSDFPLAALTQQQLDALPLEAAELDDLYPLSPMQQGMLFHSLLDPTGASYVNQ
LRVDIQGLDAGRFLHAWQAVLDCHEALRSGFFQGDEPMQWVARRPALPLAQHDWRGLADL
PQALDAMADAERVAGFDLARPPLMRLVLVRTHDDTHHFLWTVHHLLLDGWSSSRLMGEVL
RRYAGQPDSARSVPARYRDYIAWLSLRDGRRSEAFWREQFAPLDAPTLLADVLPRAADRG
QQLNPDQGRGQGHRSLSFGTQRTRQLQDAARRGHVTLNTLMQSAWALLLSRVTGQRTVVF
GATVAGRPSELPGAEQMLGLFINTLPVVATPLPGCPASEWVRALQSRNLDAREHEHTPLY
DIQRWAGQSGQALFDSILVFENYPIDEALKQAAPGGLRFERVTQCEETHYPLTLTVQQQG
EELMLGFAYARDRFDAACIDMLVSCMERLVEALADSLSHPLRPLGELDLLGAGQKQRLAL
RAINDPKWPASAPVHRLIERRAEAQPEAPALLCGEHLMSYAALNLRANQLAHRLIASGVE
PDVRVGIALERGIGMLVALLAVLKAGGTYVPLDPDYPAERLEHMVQDSGMTLLLTQRALK
SRFAVSGSTALLEIDALDTSRESQHNPDVALHGENLAYVIYTSGSTGRPKGVGIAHHALS
AHVRASIGLFGLAPSERMLQFSTLNFDGFVEQTFPPLAAGASVVLRGTDLWDSARLHREI
VGQRITVADLTTAYWLLMAQDFSRQRPRDWGALRQVHAGGEAMPPEGINAWRDAGLGHVK
LLNTYGPTEATVTASVLDCTPYVAGELPLPTQMPIGGPLPGRSLHVVDASLQLVPEGVAG
ELCVGGAMLARGYLNRAGFTSERFVADPFSDDGERLYRTGDMVRWREDGQLEYLGRIDHQ
VKIRGFRIELGEIEALLLAQPGVREAIVVAHDRPGGARLVAHVSPASLDADALRVRLASA
LPDYMVPSALVVLDALPLNANGKIDRNALPVPQWHSGDAFEAPSGALETQLAAIWAEVLG
ARRVGRNDNFFELGGHSLLAMQMVARVQAAMQRQLSVVDAFQAPVLAGLAALLDDRGQQA
TAGQALSEIDSFIDSLETM
NT seq
7800 nt
NT seq
+upstream
nt +downstream
nt
atgacccattccctgattcatcccaccatcgcccgcaccgtgtccgagggcgacgccgtg
gccctgtcctatgcgcaggagcagctgtgctttctgcagaagctcgaaccggggctcacg
gcctacaacctgcctcgcgtctttcggctggccggcctgctcgatgcgggcgcgctggag
cgtgccttccaggcactgatcgcgcgccattccgtcttgcgaacccgcttcttcgagcag
gacggtgtgccaatgcagagcgttcaggccgacgcgccgttcgcggtggagcgcatcgac
ctgtcgggcctggacgtcgaagcgcagaaggcaccgctggacgaggccgtgcgacgcacg
gccgggcatgtgttcgacctgggcgtggcgcccgcgatggtcgcgtgcctcgtgaagctg
ggagatgaacggcatgtgcttgccgtctgcttgcaccacatcgtgtccgacgcctggtcg
aacccgatcctcgcgcgcgatctggccgaggcctaccgccttgccttgcacagcgccggc
ccggtcaggctgccgccgcttgccgtgcagtacgccgactatgcggtgtggcagcgcgcg
aatgtagagggcggcgcgctggagcgccagcttgcgcactggaaccggcatctgggtccg
gaggttccggtgctcgacctgccgaccgaccgcgcgcggccctcgcgcaagagcttcgct
ggaaccgcgctcggcttcgatgtgccgccagcgctcgcgctcgccgtgcagaagttctgc
cgcgccgagaaatgcacgcctttcgtcgccttgttcgcggcatggcaggtgctgcttgcc
cgttccagcggccagaacgactttaccgtcggcgtgcccaacgccggacgccagcacgag
gaagtgagcgagctgctcggcttcttcgtgaccacccaggtgttccgcgcgcggctgtcg
ccgcgccagagcctgcgcgagatctgccggcaggtgcgcgccgacgcgctggcggcgctc
gacaatgccgagctgcccttcgaggtgctgctcgcgagccgcacggaccggcgcgacccg
gcgcgcagcccgctgttccaggtgatgttcggcgtgcagatggctggcgagacggtggca
ttcgatctcgagggcgtgcgcgccgaaatcgaggagttcgacgacgcgggtgccaaattc
gacctgtcgctcgacttctatgtcgacgcgcggggcgttcgcggccgcctcgaatacaac
accgacctgttcgaggaaagcaccgcgcgacgtctggtggcgcgctatctgcgggtgctt
gaagccctcgcgaccgagcctgacagcgtgctcgccaagctcgtgctgaccagcgagggc
gagcaagcacaactgatgcgtcagagcgagaacctgccgcatcgcgcctgcgccgatccc
gtgcaccgcctgatcggccagcaggccaggcgcacgccggaagcggtggcgctggtgttc
gggcatgtgtcgctgagctacgcgcagctcgaagcacgcgcgaaccgcctggcgcaccgc
ctgatcgcgctcggcgtgcggcccgacacgaaggtgggcattgccacggaacgcagcgtg
gagatggtggtggggctgctggcgatcctgaaggccggtggcgcctacgtgcccatcgac
cccgagtacccgcaagaccgcatcatctacatgctcgaggacagcggcgtctcgttgctg
ctcacccagagccacatcgcgcgtgcgatcccggtgcgcgaggacgtgcagacgatcgaa
ctggacttgctggacctggagacgggtccaagcgtcgaccccgacgtgcccctgcacggc
gaacacctggcctatgtgatctacacctccggctccaccggccggcccaagggggcgtcc
aaccgccaccgctcgctctacaaccgtctggcctggatgcaggacgcgtattcgctcgat
gagacggatacggtgttgcagaagacgcccttcagcttcgacgtgtcggtgtgggagttc
ttctggccgctgatgcagggcgcacgtctggtggtcgcgcagccgggcgatcaccgcgag
ccgggcaggctggtcgaatcaatccgccgccacggcgtcaccaccatccacttcgtgccc
tcgatgctgcaggccttcgtggcccatgaaggcatcgaggcctgcacgagcctcaagcgc
atcgtgtgcagcggcgaggcactgcccgccgaggcgcaggccagggtgttcgagcgcctg
ccgggcgcgggcctgtacaacctctatggcccgaccgaagcggccatcgacgtgacgcac
tggacctgccaggcggacgggcgcaaccacgtggccatcggccgtccgatcgcgggcacg
aagacctacgtgctggacgccggcctgaacctcgtgccgcagggcgtgggtggggagctg
tacctgggcggtatcgggctggcgcgcggctatctggacaagagcgctctcacgtcggag
cgcttcatcgccgatccgttcggcgacacgggcgagcggctgtaccgcacgggcgacctg
gtgcgctggcgcgaggacggccagctggagtacctggggcgcatcgaccaccaggtgaag
atccggggcttccggatcgagctgggcgagatcgaggcgcagctgctggtgcagcccgag
gtgcgcgaggcggtggtcatcgccgacgacggtcccgggggcgcacggctggtggggtat
gtgtcgttgaaggcgaatcagcctctggagccggcggcgctgaagacgcgtctggccacg
gtgctgcccgactacatgatcccctcggcactggtggtgctcgatgcactgccgctgaac
gccaacggcaagatcgaccgcaaggcgttgcctcgacccgagcggccgctgagcggcttg
cacgaggtacccgccgagggcgtcgaacaggttctggccggcatctgggctgcggtgctc
cgcgtggcatcggtcgggcggcacgacaacttcttcgaactcggcggcgattccatcctc
agcctgcagatcgtctcccggcttcgcgcggccggatggaagctgacgccacggcagatg
ttcgaccggcagaccatcgccgaactcgcggaggtggccgagcccgaggatgcggtgaca
gcgcaggcgggagtggggggcacggtcgagggcatggtgccgctgctgccgttccaggcc
gagttcttcgccaccgacattccctgccgccatcattggaaccaggcgctgctgtttcaa
agccgtgagcgactcgacccggtggcactcgaagccgcgctgcaggcgcttgtgcggcac
cacgatgccttgcgtctgcgtttcgtgcagggcgcagacggccagtggcggcaggcgtgt
tcgcccgccgaaacctcgcctgccggccgcctgctgtgggtgcgccaggctcgcgacgcc
ggcgccatcgaagcgctgtgcgaagaggcacaacgcagcctcgacctggcccgcggcccc
atgctgcgtgcgcttgccatcgaggtggcggacggcggcgcacgcctgttgctcgccatc
catcacctggtggtcgacgccgtgtcatggcgcgtgctgctccaggacttgcagcgcgcc
cacgcgcagtgtcttgaaggccggctgccgtcgtttcccgccaagagcagcagcttccag
gactgggcactggcattgcaggcgcgcgccgcttcgctcgacgccgaactgccctattgg
caggcgctggccgacgcccccgtcaccttgccctgcgaccacccgcacggcgtcaacacg
gcggcgacgcgtgagttcgtcgagctgcggctggaccgcgagcatacccaggcgctgctc
aaggacgtacccgccgcctaccgtacccggatcaacgatgtactgctgacggcgctcggc
cgcgcgctgtgcgactggagcggtcacgagcgcgtgctggtcgatgtggagggccatgga
cgcgaagacctcttcgtgcagctcgacctttcgcgcagcgttggctggttctccagcctg
ttcccggtgctgctcgacccgctcggcaccccgggcgacgcgctgcgccgcgcgaaggaa
caactgcggcgcgtccctggccgcggcatcggctacggcgtgctcaagcacatgggcaat
gacggccagcgccgcgcgctcgcggcactgcccagggcgcaggtggtcttcaactacctc
ggccagctcgacggcagcctggatgcgcaggggccctggcacttggcgggtgagtcgccc
ggtgcgtcgaccgacggggcggcaccactctcgcattccttcaccgtcaatggccaggtc
caagacggagagcttcgcctgagcgttggttacagccgggcacgttatgagcgcgcgacg
gtgcagcgctgggccgagcggtttcagcaggagttggaaggcctcatcgcccattgcacc
ggcggcgcacgtggcgtgacaccttcggacttcccgcttgccgcgctcacgcagcagcaa
ctcgacgctctgccgttggaagcggccgagctcgacgacctgtacccgctctcaccgatg
cagcagggcatgctgttccacagcctgctcgatccgaccggtgccagctacgtgaaccag
ttgcgggtcgacatccagggcctggacgcaggccgcttcctgcatgcctggcaagccgtg
ctcgactgccacgaggcgttgcgcagcggcttcttccagggcgatgagccgatgcagtgg
gtggcacgccgtcccgcgctgccgctggcccagcacgactggcgcggactcgccgatctg
ccgcaggctctcgacgcgatggccgatgccgagcgggtagccgggttcgacttggcccga
ccgccgctcatgcgcctggtgctcgtgcgtacgcacgacgacacccatcacttcctctgg
accgtgcatcacctgctgctggacggctggagcagttcgcggctgatgggcgaagtgctt
aggcgctacgccggccagcctgactcggcaaggtccgtaccggcccgctaccgcgactac
atcgcatggttgtcgctgcgtgatggtcgccgtagcgaagccttctggcgcgaacagttc
gcgccgctggacgcgcccacgctgctggccgatgtgctgccacgcgcggcggaccgtggc
cagcaactgaatccggatcaagggcgggggcagggccaccgcagcctgtcgttcggcacg
caacgcacgcgccagttgcaggacgcggcacgtcgcgggcatgtgacgctcaacactctc
atgcagtccgcctgggcgttgctgctgtcccgcgtgacgggacagcgcacggtggtcttc
ggcgccacggtggcgggccgtccttcggaactgccgggcgccgaacagatgctcggcctg
ttcatcaacaccctgccggtcgtcgcaacgccgctgcccgggtgcccggcgagcgaatgg
gtgcgcgcgctgcagtcacgcaacctcgacgcccgcgagcatgagcacacaccgctgtac
gacatacagcgctgggccgggcaaagcggccaggcgctgttcgacagcatcctggtgttc
gaaaactacccgatcgacgaggcgctgaagcaggccgcgccgggcggcttgcgcttcgag
cgggtgacacagtgcgaagaaacgcactacccgctgacgctgaccgtacagcagcagggg
gaagaactcatgctgggttttgcctatgcgcgcgaccgcttcgacgccgcgtgcatcgac
atgctggtctcctgcatggagcggctcgtcgaggcactcgccgacagcctgtcgcacccc
ctgcggccgctgggtgaactggacctcctcggtgcggggcagaagcagcgcctggccttg
cgcgccatcaacgatccgaaatggcctgcctctgcgccggtacaccgcctgatcgagcgc
cgggccgaggcgcagccggaagcgcccgcgctgctgtgcggcgaacacctgatgagctac
gcggcactgaacctgcgggccaaccagctcgcacaccggctcattgcttcgggcgtggag
ccggacgtgagagtcggcattgcactggaacgcggcatcggcatgctcgtggcgctgctt
gccgtgctgaaagccggcggcacctacgtgccgctcgatccggactatccggccgaacgg
ctcgaacacatggtgcaggacagcggcatgacgttgctgctcacgcaacgcgcgttgaag
tccaggttcgcggtctccggctcaacggcgctgctggagatcgacgccctcgacaccagc
cgcgagtcgcagcacaacccggatgtggccttgcatggcgaaaaccttgcctatgtgatc
tacacctcgggctccaccggcaggcccaagggcgtgggcattgcgcaccacgcgctgtcg
gcgcatgtgcgggcctccatcggcctcttcggtctggcgccgtcggaacgcatgctgcag
ttttccacgctgaacttcgacggattcgtcgagcagacctttcctccactggcggcaggc
gcatcggtggtgttgcgaggcaccgatctgtgggacagcgcgcggctgcaccgcgagatc
gttggccagcgcatcaccgtggccgacctcaccaccgcctactggctgttgatggcgcag
gacttttcccggcagcgcccccgcgactggggtgcgctgcggcaggtgcatgccggtggc
gaggccatgccaccggagggcatcaatgcctggcgcgacgcggggctggggcatgtcaag
ttgctgaacacctatggcccgaccgaagcgacggtgacggcctcggtgctcgattgcacc
ccctatgtcgccggcgaactgccattgccgacgcaaatgcccatcggcggcccgctgcct
ggccgctccttgcacgtggtcgatgccagcctgcagctggttccggagggcgtggccggt
gaactgtgtgtcggcggtgcgatgcttgcgcgcggttacctgaaccgcgcgggcttcact
tcggagcgcttcgtcgcggacccgttcagcgacgacggagagcgcctctatcgcacggga
gacatggtgcgctggcgcgaggacggccagctggagtacctgggacgcatcgaccatcag
gtgaagatccggggcttccgcatcgaactgggagagatcgaggcgctgctgctggcccag
cctggcgtgagggaggccatcgtcgtggcgcacgaccgccctggcggcgcgcgcctggtc
gcgcatgtgtcgcccgccagccttgatgcggacgcgttgcgcgtgcgcctcgcgtccgcg
ctgcccgactacatggtgccctctgcactggtggtgctcgatgcgctgcccctgaacgcg
aacggaaagatcgaccgcaacgcgctgccggtaccgcaatggcacagcggcgatgccttc
gaggcgccgagcggtgcgctggaaacacagctcgccgcgatctgggccgaagtgctcggc
gctcgacgcgtgggaaggaacgacaacttcttcgaactcggaggccactcgctgctggcc
atgcagatggttgcgcgcgtgcaggccgccatgcaacgccaattgagcgtggtcgacgca
ttccaggcgccagtgctcgccgggctggcggctctgctggacgatcgcggccagcaggcg
accgccgggcaagcgctgtccgagattgattccttcatcgacagtctggagacgatgtga
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