Variovorax sp. PMC12: C4F17_27855
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Entry
C4F17_27855 CDS
T05380
Name
(GenBank) sensor histidine kinase
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_27855
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vam01001
]
C4F17_27855
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vam02022
]
C4F17_27855
Enzymes [BR:
vam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
C4F17_27855
Protein kinases [BR:
vam01001
]
Histidine kinases
NtrC family
C4F17_27855
Two-component system [BR:
vam02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
C4F17_27855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
dCache_1
HATPase_c_5
HATPase_c_2
TmoB
Motif
Other DBs
NCBI-ProteinID:
AVQ84888
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Position
2:complement(77257..79113)
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AA seq
618 aa
AA seq
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MTSREPARRFDLPFDDSRRWRGLARWCGALALVAMAAFAGHQFAMQAGLARLREAADHRL
DMLATGLDADLARFEYLPALLEMTPIVPALLETPSDTHLRDAVNRYLDGVNATAGAEMLY
VLDRSGISQAASDWNRPGTTLGQDLSFRPYVIDALSQGRGRFYGVGITSNRPGYYLSYAL
RRGQPTRGVVAVKVNLEEAERAWRKLPGDVALIDQRGVVILSTRKDLKFRPLLPLDALQR
AEVLRSRPYGNATLQPLQWTQKQALDRNVQVIALDGTDQLASARPLRDAPWQLMVLDNLA
PVRVAARNTAITASLAMAVLLLVAVALLQRRRAVHQKLANQAALQAAHDTLESTVVARTA
QLRAAQGELVHAGKLAALGQMSVGVAHELNQPLTAMRTLSESAGILLDRNRLDDVRGNLQ
RICGMVDRLARLTSQLKTFAHRSDLPLVPLPLSQAIADAQAMVAEAARKHRIGIEVDVQP
ATLSVMAEEAALGSVLANLMRNAVDAMQEAPVRTLRLAARLEEGRVILRVSDTGTGIHPD
ILPRLFEPFVTSKPAGAGLGLGLVISAQLVRAMDGTLRAANLPQGGACFVVDLPAAIAVI
HNPPGSFPSNSLDSNAQE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
ttgacttcaagggagccggcccggcgcttcgatttgcctttcgacgattccagacgatgg
cgcggcctggcgcgctggtgcggcgcgctggcgctggtggcaatggccgccttcgcgggc
caccagttcgccatgcaggccggcctggcgcggctgcgcgaagctgcggaccatcgcctc
gacatgctcgcgacgggcctggacgccgacctggcccgcttcgagtacctgcctgcgcta
ctggagatgaccccgatcgtccccgcgctgctcgaaacgccgtcagacacacacctgcgc
gacgcggtcaaccgctacctcgacggcgtcaacgccaccgcgggcgccgagatgctctac
gtgctcgaccgctccggcatctcgcaggcggcgtccgactggaacaggcccggtaccacc
ctgggacaggacctgtcgttccgaccctacgtgatcgacgcgctgagccaggggcgaggc
cgcttctatggcgtgggcatcaccagcaaccggccaggctactacctgtcgtacgcgctt
cggcgtggccagcccacgcgtggcgtggtggccgtcaaggtcaacctcgaggaggccgag
cgcgcctggcgcaagctgccgggcgacgtggcgctgatcgaccagcgcggcgtggtgatc
ctctccacgcgcaaagacctcaaattccgtccactgctgccgctcgacgccctgcaacgc
gccgaggtcttgcgctcgcgtccctacggcaacgccacgttgcagccactgcagtggacg
cagaagcaggcgctggaccgcaacgtccaggtgatcgcgctggacggtaccgatcagctc
gcctcggctaggcctctgcgagatgccccctggcaactgatggtgctcgacaatctggcg
ccggtgcgggtggcggcgcgcaacacggccatcaccgcgagcctggccatggcggtgctg
ttgctggtggccgtcgcgctcttgcagcgccgacgcgcggtgcaccagaagctcgccaac
caggcggcgctgcaggcggcgcatgacacgctcgaatcgaccgtggtggctcgaaccgcg
cagctgcgcgcggcccagggcgaactggtgcatgcgggcaagttggccgctttgggccag
atgtcggtcggcgtggcgcacgaactcaaccagccactcacggccatgcgcactctctcc
gagagcgccggcatcctgctcgacaggaatcggttagacgacgtgcgcggcaacctgcag
cgcatctgcggcatggtcgaccggctcgcgcgcctgacctcgcaattgaagacattcgcg
caccgcagcgacctgccattggtgccgctgccgttgtcgcaggccatagccgatgcacag
gcgatggtggccgaggccgcgaggaagcaccgcatcggcatcgaggtcgatgtgcagccc
gccacgctgagcgtcatggccgaggaggcggcgctgggcagcgtgctggccaacctgatg
cgcaatgccgtcgacgccatgcaggaggcgcccgtgcgcacactcaggctcgcagcgcgg
ctggaggagggccgtgtgatccttcgtgtgagcgataccggcaccggcatccatcccgac
atcctgccgcggctgttcgaaccttttgtcaccagcaagccggcgggtgccggtctgggc
ctgggcctcgtgatctcggcacaattggtgcgcgcgatggacggcacgctgcgcgcagcc
aacctgccgcagggcggtgcctgcttcgtggtcgacttgcctgctgccattgccgtgatc
cacaacccgcccggttcctttccttccaattcccttgattccaatgcacaggagtga
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