Variovorax sp. PMC12: C4F17_28005
Help
Entry
C4F17_28005 CDS
T05380
Name
(GenBank) pyridine nucleotide-disulfide oxidoreductase
KO
K00529
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:
1.18.1.3
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00071
Fatty acid degradation
vam00360
Phenylalanine metabolism
vam00362
Benzoate degradation
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
vam01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
C4F17_28005
09105 Amino acid metabolism
00360 Phenylalanine metabolism
C4F17_28005
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C4F17_28005
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.18 Acting on iron-sulfur proteins as donors
1.18.1 With NAD+ or NADP+ as acceptor
1.18.1.3 ferredoxin---NAD+ reductase
C4F17_28005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Reductase_C
Pyr_redox
DAO
NAD_binding_8
HI0933_like
Pyr_redox_3
NAD_binding_7
AlaDh_PNT_C
Lys_Orn_oxgnase
3HCDH_N
Shikimate_DH
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AVQ84910
LinkDB
All DBs
Position
2:107561..108814
Genome browser
AA seq
417 aa
AA seq
DB search
MTSRGIVIVGAGQSAAVAAHALREHGYSGRITMVGRERHRPYERPLLSKAVLVAAEAPRL
DVLTDDAWTRSDVELLSGSEAVALDLQRQHVRLADGRILAYESCLIATGGEATTLACVPA
GRAGVHYIRTLDDAHRLRTALQAKPQVAVLGGGFLGLEVANSALSAGASVTVLERAPSLL
DRFVPPQASEWLEAKLHAAGARLLLGASCSGVHSLPQGRLRLSTSTGDLEVDEVVIAIGL
SPNDALARDAGLETAAGSGILVDASCRTSNAHVFACGDCTSQRRAGQAAPTRLESWQNAN
EQGRTAAAAMLGLPLPAPAVPWFWTDQGKHNIQMLGLPASDLEYVRRGSPANDKVLWIGH
RDGVPVHGVAINAGADLRAVRPLFERGRRVQWDDFALDATNLRTWAKQMQADVATTT
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgcgcggcatcgtcatcgtcggtgcgggccagtcggcggccgttgcggcacac
gccctgcgcgagcacggctatagcgggcgcatcacgatggtgggccgggagcgccacagg
ccgtatgagcgccctctgttgtcgaaggccgtcctggtggctgcggaggcgcccaggctc
gacgtgctcaccgacgacgcctggacacgcagcgacgtcgaactgctgagcggcagcgaa
gcggttgcactggatctccagcggcagcatgtccgtcttgcggacgggcggatactcgcg
tacgagtcctgcctgatcgccaccggcggtgaggccaccacgctggcgtgcgtgccggcc
ggccgcgcgggcgtgcactacatccgcacgctggacgacgcgcatcggctgcgcaccgca
ctccaggcaaagccgcaggtcgcggttcttggcggtggattcctcggcctcgaggtcgca
aactcggcgctgtccgcgggcgcctcggtgacggtgctcgaacgcgcgccatcactgcta
gatcgcttcgtgccgccgcaggcgtctgaatggctcgaagcgaagttgcacgcagcgggc
gccaggctcctgctcggcgcttcctgcagtggcgtccattcattgccgcaaggccggttg
cgcttgagcaccagcaccggcgatctcgaagtggacgaggtggtcatcgccatcggcttg
tctccgaacgacgcgctggcccgcgatgcggggctggagacggcagcaggcagcggcatt
ttggtcgacgcgtcttgccgcacgagcaacgcacacgtgttcgcatgcggcgactgcacc
agccagcgccgtgccggacaggcggcgccgacgcgccttgaatcctggcagaacgcgaac
gagcaggggcgcactgccgctgccgccatgctcggcctgcctcttcccgcacccgcggtg
ccgtggttctggactgaccagggcaaacacaacatccagatgctgggcctgccggccagc
gatctggaatacgtgcgccgtggtagcccggccaacgacaaggtgctatggatcggccat
cgggacggcgtgccggtgcacggcgtcgcaatcaacgcaggcgccgatctgcgggccgtt
cgcccgctcttcgaacgcgggcggcgcgtgcagtgggacgacttcgcactggacgctacc
aaccttcgcacatgggccaagcagatgcaagccgacgtcgcgaccaccacttaa
DBGET
integrated database retrieval system
