Variovorax sp. PMC12: C4F17_28200
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Entry
C4F17_28200 CDS
T05380
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_28200
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_28200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_28200
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_28200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_29
SMC_N
AAA
RsgA_GTPase
AAA_23
AAA_27
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AVQ84948
LinkDB
All DBs
Position
2:148968..149723
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AA seq
251 aa
AA seq
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MNDAILSIRGLRKSFGPTEIMRGVDLELRGAERHALIGPNGAGKSTLFHLISGHLAPSAG
EIRFEGQQIAGRTPQAINRLGLARSFQITNIFPKLTVFENIRLAVMRLHGLQYNFWTFID
RDRGIREQTERLLELVRLQARAATVAGEMAYSEQRSLEIAMTLASDPKVILLDEPMAGMS
TEETHYTAQLIREVTQGRALMIVEHDMDVVFSLSDRISVLVYGQVIATGTPEEIRGNAAV
KEAYLGEEVAP
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgcgatcctcagcatccgcggtttgcgcaagtccttcggccccacggaaatc
atgcgcggcgtggacctggagctgcgcggcgccgaacggcacgcgctgatcgggcccaac
ggcgcgggcaagtccacgctcttccacctgatctcgggccacctggcgccgtcggccggg
gagatccgcttcgagggacagcagatcgccgggcgcacgccgcaggccatcaaccggctc
gggctggcgcgctcgttccagatcaccaacatcttcccgaagctcacggtgttcgagaac
atccgcctggcggtgatgcgcctgcacgggctgcagtacaacttctggacattcatcgac
cgcgaccgcggcatccgcgagcagaccgagcgcctgctggagctggtgcggctgcaggcg
cgcgccgccaccgtcgcgggcgagatggcgtactccgagcagcgctcgctcgagatcgcg
atgacgctggcctccgacccgaaggtgatcctgctggacgagccgatggcgggcatgtcc
accgaggagacccactacaccgcgcagctgatccgcgaggtgacgcagggccgcgcgctg
atgatcgtggagcacgacatggacgtggtgttctcgctgagcgaccgcatcagcgtgctg
gtgtacggccaggtgatcgccaccggcacgcccgaggagatccgtggcaatgcggccgtc
aaggaagcgtacctcggcgaggaggtggcgccatga
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