Variovorax sp. PMC12: C4F17_28250
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Entry
C4F17_28250 CDS
T05380
Name
(GenBank) ABC transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_28250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_28250
Transporters [BR:
vam02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C4F17_28250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
AVQ84958
LinkDB
All DBs
Position
2:161156..162175
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AA seq
339 aa
AA seq
DB search
MTSLTRRRALRTLSALPAAGIVTALPRIARAAEFSYKYGNNLPLTHPLNIRAQEAAEHIA
KETKGRVEIKIFPNNQLGGDTDMLAQVRSGGIEFFTPSALVIATLVPVAAINAVGFAFND
YAQVWAAMDGKLGAHVRGAIAKSRLYAFEKMWDNGFRQTTSSKAAVATAKDMDGLKIRVP
VSPLSISMFKGLGAAPASLQFSEVYSALQTKIVDAQENPLPIIQVAKLFEVQKFCSLTNH
IWDGYWFIANGRAWEALPEDLKTIVARAINDAGMQQRDDIRKLNESVVGDLQAKGLSINR
PAAESFRAKLRESGFYGEWKGRFGPEAWALLEGAVGKLA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgctgacccgcaggcgcgccctgcgcaccctttccgccctccccgccgccggc
atcgtcacggcgctgccgcgcatcgcacgcgccgccgagttctcgtacaagtacggcaac
aacctgccgctgacgcatccgctgaacatccgcgcgcaggaagcggccgagcacatcgcc
aaggagaccaagggccgcgtcgagatcaagatcttccccaacaaccagctcggcggcgac
accgacatgctggcgcaggtgcgctcgggcggcatcgagttcttcacgccctcggcgctg
gtcatcgccacgctggtgccggtggcggccatcaatgccgtgggctttgccttcaacgat
tacgcccaggtgtgggccgcgatggacggcaagctcggcgcacatgtgcgcggcgccatc
gccaagtcgcgcctctatgctttcgagaaaatgtgggacaacggctttcgccagaccacc
agcagcaaggccgcggtagccaccgccaaggacatggacggcctgaagatccgcgtgcca
gtgagcccgctgtcgatctcgatgttcaagggcctgggcgccgcgccggccagcctgcag
ttcagcgaggtctactcggcgctgcagacgaagatcgtcgatgcgcaggaaaacccgctg
cccatcatccaggtcgccaagctgttcgaggtgcagaagttctgctcgctcaccaaccac
atctgggacggctactggttcatcgccaacggccgcgcctgggaagcactgcccgaggac
ctgaagaccatcgtcgcccgcgccatcaacgatgccggcatgcagcagcgcgacgacatc
cgcaagctcaacgaatcggtggtcggcgacctgcaggccaagggcctgagcatcaaccgt
cccgccgccgagagctttcgcgcgaagctgcgcgagtcgggcttctacggcgaatggaaa
ggccgcttcggccccgaggcctgggcgctgctcgagggcgcggtcggcaagctggcctga
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