Variovorax sp. PMC12: C4F17_28440
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Entry
C4F17_28440 CDS
T05380
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_28440
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_28440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_28440
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_28440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
CDPS
Motif
Other DBs
NCBI-ProteinID:
AVQ84991
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All DBs
Position
2:206974..208224
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AA seq
416 aa
AA seq
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MTIDRRRFIATAATAGATLGLPVLARAQGAAEPLRLGLLTAKTGPFASGGLDMERGLQAY
LAANGQMLGGRKVELIVADTGGVPSTARTKTQELVERERAQVLMGPLAAFEALATDDYMR
ARKIPVFPVAAAEDMTQRKASPWLFRASSTSAQCAHPLADYCAKKLKYKRMVLVADDIAY
GHEMTAGFQRVFEEAGGKVVQKLFPPLTAPDYGTFLAQLSREADAVFLGFAGSNGFRFIR
QFNEYGLRGKLALVGGMTALDEAVLRNMGDEALGIVTVNWYSAELANPVNAAFVASFRKA
YSYDPGFYAACTHVSASVLDAALAPMKGKAFDKEQLRASLQQTQAMTARGPVKFDSYGNV
VGNVYVRKVERKEGRLVNSIVDTYDNVSQFWTYDPKKFLAEPVYSRDWPPARNLVG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgaccgcaggcgcttcatcgccaccgccgccactgccggcgccacgctcggc
ctgcccgtgctggcgcgcgcccagggcgcagccgaacccttgcgcctggggctgctgacg
gccaagaccggcccgttcgcctcgggcggcctcgacatggagcgcgggctgcaggcctac
ctcgccgccaacgggcagatgctgggcgggcgcaaggtcgagctgatcgtcgccgacacc
ggcggcgtgccgtcgacggcacgcaccaagacacaggaactcgtcgagcgcgaacgcgcg
caggtgttgatgggcccgctggccgcgttcgaggcgctggccaccgacgactacatgcgc
gcccgcaagatcccggtgttcccggtggccgcggccgaagacatgacgcagcgcaaggcc
agcccctggctgtttcgtgcaagctcgacgtcggcgcaatgcgcccatccgctggccgac
tactgcgcgaagaagctcaagtacaagcgcatggtgctcgtggcggacgacatcgcgtac
ggacacgagatgaccgcgggttttcagcgggtcttcgaggaggcgggcggcaaggtcgtg
cagaagctcttcccgcccctgaccgcgcccgactacggcaccttcctcgcgcagctcagc
cgcgaggccgacgcggtgttcctcggcttcgccggctccaacgggtttcgcttcatccgg
cagttcaacgagtacggcctgcggggcaagcttgcgctggtcggcggcatgaccgcactc
gacgaggccgtgcttcgcaacatgggcgacgaggccctgggcatcgtcacggtgaactgg
tactcggccgaactcgccaacccggtcaacgctgcgttcgtcgcgtccttccgcaaggcc
tacagctacgaccccggtttctatgcggcctgcacacacgtcagcgcctcggtgctcgat
gcggcactggcgcccatgaagggcaaggccttcgacaaggagcagctgcgcgcgtcgctg
cagcagacccaggcgatgacggcacgcggcccggtgaagttcgacagctacggcaacgtg
gtgggcaacgtctatgtgcgaaaggtcgagcgcaaggaaggccggctggtcaacagcatc
gtcgatacctacgacaacgtgagccagttctggacctacgacccgaagaagttcctggcc
gaaccggtctattcgcgcgactggccgcctgcgcgcaatctggtcggctga
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