KEGG   Variovorax sp. PMC12: C4F17_28985
Entry
C4F17_28985       CDS       T05380                                 
Name
(GenBank) sensor domain-containing diguanylate cyclase
Organism
vam  Variovorax sp. PMC12
SSDB
Motif
Pfam: EAL GGDEF PAS_9 PAS_8 PAS PAS_4 HAMP PAS_3 DUF6566 Y4nK_C
Other DBs
NCBI-ProteinID: AVQ85087
LinkDB
Position
2:complement(324189..327392)
AA seq 1067 aa
MVHFITRRLSRLSVGRKLLVIYLLDLSAVIFISGILINEKFIAIDFGRKEMAGAAYIDRM
RPSLLAAAGWHGAEPAPPLALERLEQQYGEGLQSAEVSQRFREALASAAQAGPAGRETAR
RAALEQGRALVTRIGNQSNLILDPDLDSYYTMSLVLLRFPELLELGADMAARLHAPGASG
LAATEARTQYFILEGRIDAIAASIRSDYAEAFAAAKGPLQARLDPSRARLLASIEGFRRA
SRSVLESSDSTDAGASHRGLAAFDAAQQTLFAELDGAWSGAIGELDAMLTSREHGFFARM
WMHLGTALFLLLMILTAVFYVARQISLPLRRLSGVVDTVRRTGDHSLRAHWDSGDEIGLL
VLGFNDMLAQLDRQRQAQQELAASARAAEAQRDLVAAIPIPLMVTAIPNHEVLNANPSAL
AWLGGGTRDPWALGLAPGVRSRFFQQLADRGAVDEFEVRWLGGAEPSWAVLSARRLVYQG
QDALLTAFTPINHLKLMEQRLMLWAKVFEASSEGILIIDGQHRILTANRALCRLTGHDLS
DLVGEPPEQLMRDDTAHFADLWPVLDQRGTWQGEVSVRRRNGDSYPAWLVASVVRDGPDR
ISHYIFTSIDVSDRKRSEARIRFLAHHDVLTELPNRSLCIERLGLALQQARRKGQRVGVL
FIDLDRFKNINDSLGHHVGDALLRSVAARMSQAVRPGDTVSRLGGDEFVVVLNNVADGQE
ILSLVERRLIALIRQPHDIDGAEIHVSCSVGIAVYPDDAQDIDALMRHADVAMYQSKASG
RDTARFFTPEMNERAQQRLQLESSLRHAIERGELSLHYQPRIDAHTGALICVEALLRWQS
AELGQVPPAQFIPIAEESGQIVAIGAWVIEQACAQHAAWRREGLGAIRVAINMSALQLRD
GGLLEVLRGAIALHGVSPGDLELELTESTLMDAAEQSLSQLQALKSLGVMLSIDDFGTGY
SSLNYLNRFPIDKLKIDRSFIHRMLGDPTDMAIARAIIGLGHALGLRVVAEGVERREEAD
SLRAARCDELQGFLIARPMPPGKLGGWIEQASPPAWHAHGAFDGAPA
NT seq 3204 nt   +upstreamnt  +downstreamnt
atggtgcatttcattacgcgtcgcctcagccggctcagcgttggccgcaaactgctggtc
atctacctgctcgacctgagcgcggtcatcttcatcagcggcatcctcatcaacgagaag
ttcatcgcgatcgatttcggccgcaaggagatggcgggcgcggcctacatcgaccgcatg
cgcccgtcgctgctggccgccgccggctggcacggcgccgagcctgcgccgccgctggcg
ctcgagcggctcgagcagcagtacggcgagggcttgcagagcgccgaggtcagccagcgg
ttccgcgaggcgctggcgtccgccgcccaggccggccccgccgggcgcgagacggccagg
cgcgcggcgctcgagcaggggcgcgcactggtgacgcgcatcggcaaccagtcgaacctg
atcctcgaccccgacctcgacagctactacacgatgtcgctggtgctgctgcgctttccg
gagttgctcgaactcggcgccgacatggccgcgcggctgcacgcccctggtgccagcggg
ctcgccgcgaccgaggcgcgcacgcagtacttcatcctcgaagggcgcatcgatgccatc
gcggccagcatccgcagcgactatgcggaggctttcgccgccgccaaggggccgttgcag
gcgcggctcgatccgtcgcgtgcgcgcctgctggccagcatcgaggggttcaggcgtgct
tcgcgcagcgtgctggaatcgagcgacagcaccgacgccggcgcgagccaccgcggtctc
gcggcgttcgacgcggcccagcagacgctgtttgccgagctcgacggcgcgtggtcgggc
gccatcggcgagctcgacgccatgctcacctcgcgcgagcacggcttcttcgcacgcatg
tggatgcacctgggcacggcattgttcctgctgctgatgatcctcacggcggtgttctac
gtggcgcgccagatctcgctgccgctgcgccggctgtccggcgtggtcgacaccgtgcgc
cgcaccggcgaccacagcctgcgcgcgcactgggacagcggcgacgagatcggcctgctg
gtgctgggcttcaacgacatgctcgcgcagctcgaccgccagcggcaggcgcagcaggag
ctcgcggccagcgcccgcgcggccgaagcgcagcgcgacctggtcgcggccattccgatc
ccgctgatggtcacggccattccgaaccacgaagtgctcaacgccaaccccagcgcgctg
gcgtggcttggcgggggcacgcgcgacccgtgggcgctgggattggcgcccggcgtgcgc
tcgcgcttcttccagcagctggccgaccgcggcgccgtcgacgaattcgaggtgcgctgg
ctcgggggcgccgagccgtcgtgggcggtgctgtcggcgcggcggctggtctaccagggg
caggacgcgctgctcaccgccttcacgcccatcaaccacctcaaactgatggagcagcgg
ctgatgctctgggccaaggtgttcgaggcctcgtccgagggcatcctgatcatcgacggg
cagcatcgcatcctcacggcgaaccgggcgctgtgccgcctcaccggccacgacctgagc
gatctggtgggcgagccgcccgaacagctcatgcgcgacgacacggcgcatttcgccgac
ctgtggccggtgctcgaccagcgcggcacctggcagggcgaggtcagcgtgcgccggcgc
aacggcgacagctaccccgcctggctggtcgccagcgtggtgcgcgacggaccggatcgc
atctcgcactacatcttcacgtccatcgacgtgagcgaccgcaagcgcagcgaggcgcgc
atccgcttcctggcccatcacgacgtgctgaccgagctgcccaaccggtcgctgtgcatc
gagcgcctggggctggcgttgcagcaggcccggcgcaaggggcagcgcgtgggggtgctg
ttcatcgacctggaccgcttcaagaacatcaacgactcgctgggccaccacgtgggcgac
gcgctgctgcgctcggtggccgcgcgcatgagccaggccgtgcggcccggcgacacggtg
agccgcctgggcggcgacgagttcgtcgtggtgctgaacaacgtggccgacggccaggag
atcctgtcgctggtcgagcgccggctcatcgcgctgatccgccagccccacgacatcgac
ggcgccgagatccatgtgtcgtgcagcgtgggcatcgcggtgtaccccgacgacgcgcag
gacatcgacgcgctcatgcgccatgccgacgtcgccatgtaccagagcaaggcgagcggg
cgcgacaccgcgcgcttcttcacccccgagatgaacgagcgcgcccagcagcgcctgcag
ctggagtcgagcctgcgccatgcgatcgagcgcggcgagctgagcctgcactaccagccg
cgcatcgatgcgcacaccggcgcgctgatctgcgtggaggcgctgctgcgctggcagagc
gcggagctggggcaggtgccccctgcgcagttcatcccgatcgccgaggagtcggggcag
atcgtggccatcggcgcctgggtgatcgagcaggcctgcgcgcagcacgccgcctggcgc
cgcgaggggctgggcgcgatccgggtggcgatcaacatgtcggcgctgcagttgcgcgac
ggcggcttgctggaggtgctgcgcggcgccatcgcgctgcacggcgtgtcgcccggcgat
ctggagctggagctcaccgagtcgacgctgatggatgcggccgagcagtccctgtcgcag
ctgcaggcgctgaagtcgctcggcgtgatgttgtcgatcgacgacttcggcaccggctat
tcgagcctgaactacctcaaccgctttcccatcgacaagctgaagatcgaccgctccttc
atccacaggatgctgggcgaccccaccgacatggccatcgcgcgagcgatcatcggcctg
ggccatgccctgggactgcgcgtcgtggccgagggcgtggagcggcgcgaggaagcggac
agcctgcgcgccgcgcgttgcgacgagctgcagggctttctcatcgcccggccgatgccg
cctggcaagctggggggctggatcgaacaggcgtcaccgccggcgtggcacgcgcacggg
gccttcgatggcgccccggcgtag

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