Variovorax sp. PMC12: C4F17_29190
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Entry
C4F17_29190 CDS
T05380
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00250
Alanine, aspartate and glutamate metabolism
vam00310
Lysine degradation
vam00350
Tyrosine metabolism
vam00650
Butanoate metabolism
vam00760
Nicotinate and nicotinamide metabolism
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
C4F17_29190
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
C4F17_29190
00310 Lysine degradation
C4F17_29190
00350 Tyrosine metabolism
C4F17_29190
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
C4F17_29190
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
C4F17_29190
1.2.1.20 glutarate-semialdehyde dehydrogenase
C4F17_29190
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
C4F17_29190
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Motif
Pfam:
Aldedh
OmdA
Motif
Other DBs
NCBI-ProteinID:
AVQ85124
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Position
2:372370..373797
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AA seq
475 aa
AA seq
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MYPELSLYIAGRFIDAQGRRTQAVHDPATLQPLGLLPWAEAEDVEAAVQAAHAAFAGWRR
VSPLERSDLLRRVAALARERAPEIGRAMTLDNGKPLADAVAEVLNAAEHVDWHAEEGRRV
YGRVVPARQPGVRQLVVREPVGVCAAFSPWNFPFGQAMKKAAAAIAAGCPIVLKGPEESP
SALVAMARLFHDAGLPPGVFNLLWGVPADISRQLIESPLVRVVSFTGSVPVGRQLAALAG
LHMKRMTMELGGHAPVLVFDDADVDAAVALLARLKTRNAGQVCVSPTRFHVQSGIHDRFA
AAFADALAAVKVGHGLEDGVQMGPLIHERRFQAVQALVEDARAMGAELLTGGRRIGTHGH
FHAPTLLANVPRRARVLHEEPFGPVAAMSRFDTVDEALHQANALPFGLASYVFTRSLQTA
TRVGDGLEAGMVNINHSGMAHPELPFGGVKDSGFGSEGGTESFDSFLSTKLITQI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtacccagaactctcgctctacatcgccggccgcttcatcgacgcgcagggccggcgc
actcaggccgtgcacgatcccgccacgctgcagccgctgggtttgctgccgtgggccgag
gccgaagacgtcgaggccgccgtgcaggccgcccatgcagccttcgccggttggcggcgc
gtgtcgccgctggagcgctcggacctgctgcgccgcgtggccgcgctggcgcgcgagcgc
gcgccggagatcggccgcgccatgacgctggacaacggcaagccgttggccgacgccgtg
gccgaggtgctgaacgccgcggagcacgtcgattggcatgcggaggagggccgccgcgtc
tacggccgcgtggtgcccgcgcgccagccaggcgtgcgccagctggtggtgcgcgagccg
gtgggcgtgtgcgccgccttcagcccgtggaactttcctttcggccaggccatgaagaag
gccgccgccgccatcgcggccggctgccccatcgtgctcaaggggccggaggagtcgccc
agcgcgctggtggccatggcacgcctgttccacgatgcgggcctgccgccgggcgtgttc
aacctgctgtggggcgtgcccgcggacatctcgcgccagctcatcgagtcgccgctggtg
cgcgtggtctccttcaccggctcggttccggtgggccgccagctggccgcgctggccggc
ctgcacatgaagcgcatgaccatggagctgggcggccatgcgcccgtgctggtgttcgac
gacgccgacgtcgacgccgccgtcgctttgctggcgcggctgaaaacgcgcaacgccggc
caggtctgcgtgtcgccgacgcgcttccacgtgcagtcgggcatccatgaccgcttcgcc
gccgccttcgccgacgcgctggccgccgtgaaggtgggccacggcctggaggatggcgtg
cagatgggcccgctgatccatgagcgccgtttccaggccgtgcaggcgctggtggaggac
gcccgcgcgatgggcgccgaattgctgacgggtggccgccgcatcgggacgcacggccac
ttccacgcaccgacgctgcttgccaacgtgccccggcgtgcccgcgtactgcatgaagag
ccgttcggccctgtggcggcgatgtcgcgcttcgacaccgtggacgaggcgctgcatcag
gccaatgcgttgcccttcggcctcgcgagctatgtcttcacccgctcgctgcagaccgcg
acccgcgtgggcgacggcctcgaggccggcatggtgaacatcaaccactcgggcatggcg
catccggagctgccgttcggcggcgtgaaggacagcggcttcggcagcgaaggcggcacc
gagtccttcgacagttttctcagtaccaagctcatcacccagatctga
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