Variovorax sp. PMC12: C4F17_29300
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Entry
C4F17_29300 CDS
T05380
Name
(GenBank) macrolide ABC transporter permease/ATP-binding protein MacB
KO
K05685
macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_29300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_29300
Transporters [BR:
vam02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
C4F17_29300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
ABC_tran
FtsX
SMC_N
AAA_16
AAA_21
AAA_29
RsgA_GTPase
TEP1_CUB2
DUF4396
AAA_22
DUF87
AAA_28
MMR_HSR1
AAA_18
ABC2_membrane_3
nSTAND1
AAA_25
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AVQ85143
LinkDB
All DBs
Position
2:399574..401535
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AA seq
653 aa
AA seq
DB search
MVSTSRALLETRGLRREFVAGEGTLTVLDGIDLRIDAGEMVAIVGASGSGKSTLMNILGA
LDRPTSGSYRVAGQEVADLDADGLAKLRREHFGFVFQRYQLLGELTALDNAVLPAIYAGC
DAQQRQARARLLLERLGLGERADHRPNQLSGGQQQRVSIARALMNGGSVILADEPTGALD
TSSGEEVLRLLAELNGQGHTVIIVTHDAQVARRASRVIEISDGRIVSDRRSEAATVPGAA
ELPAPPEGESRHEGRAAPARLAQTLSMATFALRAHRLRALLTMLGIVIGIAALVCVVALG
RGAQEQVMAQIRELGTNTLEIFPGRDFGDLRASAIENLSVADAEALAQQFYVDSASPNIS
VSVTALRDSAAASAQVNGVGAGLFRVRGLSLAAGRFFDARDQEARAQVAVIDQRAATALF
GSSSPLGQTVLLGEMPVQVVGVLRPMQSSFASSTPGFFVPYTTVATRLAGRQFLESITLR
IKDEISSRAAQGAVASVLRDRHGSQDFFIMNSDQVRQAATRTSRTLALLISGVATLSLMV
GGIGVMNIMLVSVTERTREIGVRMAVGARRADIVAQFLMEAVLICLIGGAAGVLLAFGLG
ALIALLMPQLPMSFSALSVVLAVVSSCLVGVAFGYLPARNAARLEPVQALARD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggtaagcacgtccagggcattgctggaaacacgcggcctgcgccgcgagttcgtggca
ggggagggcactctcaccgtgctggacggcatcgacctgcggatcgacgcgggtgagatg
gtggccatcgtgggtgcctcgggctccggcaagtcgaccctcatgaacatcctcggcgca
ctggatcggccgacttcgggcagctaccgcgtggccggccaggaggtcgcggatctggac
gcggatggactggcgaagctgcggcgagagcacttcggctttgtcttccagcgctaccaa
ctactgggggagttgactgcgctggacaatgcggtactacccgccatctacgcgggttgc
gatgcgcagcagcgccaggcccgtgcgcggctgctcctggagcgcctgggcctgggcgag
cgtgcagaccatcggcccaaccagctctcgggtgggcagcaacaacgggtctcgatcgcg
cgcgcgctgatgaacggcggcagcgtgatattggccgacgagccgacaggtgccctggac
acctccagcggtgaggaagtgcttcgcctgctcgccgaactgaatgggcaggggcacacg
gtgatcatcgtcacgcacgatgcccaggtggcccgccgcgcgtcgcgcgtgatcgagatc
agcgacggccgcatcgtctccgatcgccgcagtgaggccgcgacggtgccgggcgcggct
gagttgccggcgccgccggaaggcgagagccgacatgaaggcagagccgcgcctgcacgc
ttggcgcagacgctgagcatggcgactttcgccctgcgtgcgcaccggctgcgcgcgctg
ctgacgatgctgggtatcgtcatcggcattgcagcgctcgtgtgcgtggttgcgctgggg
cgcggcgcgcaggagcaagtcatggcccagatccgcgaactgggcaccaacacgctggag
atctttcccggccgcgacttcggcgacctcagagcgagtgcgatcgagaacctgtcggtg
gccgacgctgaggcgctggcgcagcagttctacgtggacagtgcctcgcccaacatctcg
gtgtcggtgacggcactgcgcgactccgcggcggcatcggcccaggtcaacggcgtgggg
gcgggactgttccgcgtgcgcggcctttcattggccgcgggccgcttcttcgacgcccgc
gatcaagaagcgcgcgcacaggtggccgtgatcgatcaacgcgcggccacggcgctcttc
ggtagctcatcgcccttggggcagaccgtgcttctcggcgagatgccggtgcaggtggtc
ggcgtgctgcgcccgatgcagagcagcttcgcgtcgagcacgccgggcttcttcgtgccc
tacacgacggtggcgacccgactcgcgggaaggcaattcctcgaaagcatcaccttgcgc
atcaaggacgaaatctccagccgtgcagcgcaaggcgccgtcgcttcggtgctgcgcgac
cgccacggcagccaggacttcttcatcatgaattcggaccaggtccggcaggccgccacg
cgcaccagtcgcaccctggccctgctgatctccggcgtggcgaccctgtcgctgatggtg
ggcggaatcggcgtgatgaacatcatgttggtttcggtgaccgagcgcacgcgagaaatc
ggcgtgcgaatggccgtgggcgcgcggcgcgccgacatcgtggctcagttcctcatggaa
gccgtgctgatctgcctgatcggcggcgcagccggcgtgttgctggccttcggcctgggc
gcgctcatcgctttgctgatgccgcagttgccgatgtccttttccgcgctctcggtggta
ctggccgtggtcagctcctgtctggtcggcgtggctttcggttacctgcccgcaagaaac
gccgcacggctcgagccggtgcaggccctcgcgagggattga
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