Variovorax sp. PMC12: C4F17_29380
Help
Entry
C4F17_29380 CDS
T05380
Name
(GenBank) putative 2-aminoethylphosphonate ABC transporter substrate-binding protein
KO
K02012
iron(III) transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_29380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_29380
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Iron(III) transporter
C4F17_29380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_1
SBP_bac_8
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AVQ85158
LinkDB
All DBs
Position
2:417245..418285
Genome browser
AA seq
346 aa
AA seq
DB search
MTMKQSTRRLTAVLCAAALGLAASGAAWAQKTSLLVYTALETDAMKLYKDAFEKANPDIE
VKWVRDSTGIVTAKLLAEKANPQADVVAGLAASSLALLAQEGMLQAYEPKGFNALNPAYS
DSARPPSWVGMDVWAATICFNRVEAKKLGLPKPESWQDLAKPVYKGAITMPHPASSGTGY
LDVSSWLQNMGDAEGWKYMDALHQNIAQYVHSGSKPCKQAGAGEFPIGISFEFRAHQVKK
SGAPVDLIFPKEGLGWDIEATSIMKTSKKMDQAKRFADWMASKEANQITSTWWAVVAYPG
VASKLEGIPDNYEKLLARNDLNWAAKNRERILAEWSKRYEGKAEPK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaaacaaagcacgcgccgtctcacggcggttctgtgtgcggcggcgctaggc
cttgcggccagcggcgccgcatgggcgcaaaagacctcgctcctggtctacacggcgctc
gaaaccgacgcgatgaagctctacaaggacgccttcgaaaaagccaatcccgacatcgag
gtgaaatgggtgcgcgattccaccggcatcgtcactgccaagctgctggccgaaaaggcc
aacccgcaggccgacgtggtcgccggcctggccgccagcagcctcgcgctgctggcccag
gagggcatgctccaggcctatgagcccaagggcttcaatgcgctcaatcccgcgtactcg
gacagcgcccgcccgccgtcctgggtcggcatggacgtgtgggccgccaccatctgcttc
aaccgcgtggaggccaagaagctgggcctgcccaagcccgagagctggcaggacctggcc
aagcccgtctacaagggcgccatcaccatgccccaccccgcctccagcggcaccggctac
ctcgacgtgtcctcctggctgcagaacatgggcgatgccgagggctggaagtacatggac
gcgctgcaccagaacatcgcccagtacgtgcactcgggctccaagccctgcaaacaggcg
ggcgcgggtgagtttcccatcggcatctcgttcgaattccgtgcgcaccaggtcaagaag
tccggtgcgcccgtggacctgatcttcccgaaggaaggcctgggctgggacatcgaggcc
accagcatcatgaagacgagcaagaagatggaccaggccaagcgcttcgccgactggatg
gccagcaaggaggccaaccagatcacctccacatggtgggcggtggtggcctaccccggt
gtggcatcgaagctcgaaggcattcccgacaactacgagaagctgctggccaggaacgac
ctgaactgggcggccaagaaccgcgagcgaatcctcgcggagtggagcaagcgctacgaa
ggcaaggccgaaccgaaatag
DBGET
integrated database retrieval system
