Variovorax sp. PMC12: C4F17_29615
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Entry
C4F17_29615 CDS
T05380
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_29615
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_29615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_29615
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_29615
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Peripla_BP_3
Big_2
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AVQ85196
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Position
2:466270..467436
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AA seq
388 aa
AA seq
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MIEIAKAHFRAAAFGASLCFAALTGARADINVGVVVSATGPAASVGVTQQRTVSVLPASA
GSEKINYILLDDASDTSTTVKNVRKLISESAIDLLIGPSLTPNSLAVLDVLVESGTPMIS
LAGSGAIVEPVDERRRWAFKTPQSDTHMATAIIKHMADNGVKRVAFIGFNDAYGEGWWRE
FNKLAELRKIEVVANERYTRTDASVTGQVLKLLASQPDAVFIAASGTPAVLPQATLFDRG
YRGKVYQTHGVANNDFLRVGGAKLEGTFVPAGPVLVAEQLPDSHPAKKPSLEFIRKYEAL
PNAGQRSTFAAYLWDAALILQDAAPRALKGAKPGTPEFRKALRDAIEATQDLHATNGVYS
LGPKDHIGLDQRSRVMVRIEKGSWKYIP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgattgagattgcaaaggcccatttccgggctgccgccttcggcgcgtcactgtgcttc
gcggcgctcacgggcgcgcgggccgacatcaacgtgggcgtggtggtctcggccaccggg
cccgccgcctcggtcggcgtgacccagcagcgcacggtgtcggtgctgcccgccagtgcg
ggtagtgagaagatcaactacatcctgctcgacgacgcgtccgacacctcgaccacggtc
aagaacgtgcgcaagctgatctccgagtcggcaattgacctgctgatcgggccgagcctc
acccccaactcgctggccgtgcttgacgtcctggtggaaagcggtacgccgatgatcagc
ctcgcgggctcgggcgccatcgtcgagccggtggacgaacgcaggcgctgggccttcaag
acaccgcagagcgacactcacatggcgactgcgatcatcaagcacatggccgacaacggc
gtgaagcgcgtggctttcattggcttcaacgatgcttacggcgaaggttggtggcgtgag
ttcaacaagctcgcggagctgcgcaagatcgaggtggtggccaacgagcgctacacgcgc
accgatgcttcggttaccgggcaggtactcaagctgctggcctcgcagcccgatgcggtg
ttcatcgcggcctcgggcacgccggcggtgctgccgcaggccacgctgttcgaccgcggc
taccgcggcaaggtctaccagacgcatggcgtggcaaacaacgacttcctccgagtggga
ggcgccaagctcgagggcaccttcgtgccggctggccccgtgctggtggccgagcaactg
cccgacagccatccggcgaaaaagccctcgctcgaattcatccgcaagtatgaggcgctg
ccgaacgcgggccaacgttccaccttcgccgcctacctctgggatgcggcgctgatcctg
caggacgcggcgccgcgcgcgctcaagggcgccaagcccggcacgcccgaattccgcaag
gcgctgcgcgacgcgatagaggccacgcaggacctgcatgccaccaacggcgtctacagc
ctcgggcccaaggaccacatcggcctggaccagcgcagccgggtgatggtgcgcatcgag
aagggcagctggaagtacatcccctga
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