Variovorax sp. PMC12: C4F17_30005
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Entry
C4F17_30005 CDS
T05380
Name
(GenBank) hypothetical protein
KO
K21973
blue light- and temperature-responsive anti-repressor
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
C4F17_30005
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
BLUF
TEX47
Motif
Other DBs
NCBI-ProteinID:
AVQ85267
LinkDB
All DBs
Position
2:complement(550745..552031)
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AA seq
428 aa
AA seq
DB search
MQPLIHIAYASKATQAFDPGALAQLMQSASSANERRGLTGFLLYDNRHFFQLLEGPPAVV
DETFQKIVADARHGEIVRILNEPLPARQFDEWSMSFMAMAPGELRAIDGLQDVFDADATF
TQLNPAQARRVIAAFADGRWRQNIVGRASQGRATVPGAATDAPDLTAPASAAWASAYGRS
YAYQPIVDTAALKVVSYEALVRGARGESAFQVLGAVPAAQLHGFDAEGRTEAIAQAARLG
IACDLNLNFMPQSAVASPRVLDSTVAAARRCGIGLDRIVIEITETEAIQDHRGFSESIDV
YRRQGLKVAIDDFGAGYSGLNLLAEFQPDQIKVDIALVRQIQVNGPRQSIVRAIVGLCRE
LCIDVIAEGIESTDQLRWLEDEGVHLFQGYLFAKPGFECLPMPAFPQPRQMQPSQTQAQT
LTRPSQQE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccctcattcacatcgcctacgcgagcaaagcgacacaagccttcgaccccggc
gccctggcgcagctgatgcagagcgcaagcagcgccaatgaacgccgcggactcacgggc
tttctgctctacgacaaccgccatttctttcagttgctggaaggtccgccggccgttgtc
gacgagaccttccagaagatcgtcgccgacgcgcggcatggcgagatcgtccgcatcctg
aacgagccccttcccgcgcgccagttcgacgaatggtccatgtcgttcatggccatggcg
ccgggcgaactccgcgccatcgacgggctgcaagacgtcttcgacgcagacgccacgttc
acgcagttgaatccggcacaggcgcgccgggtgattgccgcctttgccgacggacgctgg
cggcagaacatcgtcgggcgcgcatcgcaaggaagggcgaccgtccccggcgcggccacc
gacgcgccggacttgaccgcgcccgcatcggcggcctgggcgtcggcgtacggccgcagc
tatgcctatcagccgatcgtcgacacggcggcactgaaggtcgtgtcctatgaggccctc
gttcgcggagcccgcggcgaatcggccttccaggtgctgggggcggtgcctgccgcgcag
ctccacggcttcgacgccgaaggccgaaccgaagccatcgctcaagcggcgcgcctgggg
atcgcctgcgacctgaacctgaacttcatgccgcagagcgccgtcgcgtccccgcgcgtt
ctggacagcaccgtggccgcggcccggcgatgcggtatcgggctcgaccgcatcgtcatc
gagatcacggagaccgaggccatccaggaccatcgcggcttctcggagtcgatcgacgtg
taccggcgccaggggttgaaggtggccatcgacgacttcggggccggttactcggggctg
aatctgctcgccgaattccagcccgaccagatcaaggtggatatcgccctggtgcgccag
attcaggtcaacgggccgcgccagtcgatcgtgcgggcgatcgtcggcctgtgccgcgag
ctgtgcatcgacgtgatcgccgaaggcatcgagtcgacggaccagctgcgctggctggaa
gacgaaggcgtgcacctgttccagggctacctcttcgcgaagccgggcttcgagtgcctg
ccgatgcccgcgtttccccagcctcgccagatgcagccgtcccagacccaggcccagacc
cttacgcggccttcgcaacaggaatga
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